D3ZD13 (D3ZD13_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Uncharacterized protein Ensembl ENSRNOP00000012796
Organism	Rattus norvegicus (Rat) [Reference proteome] Ensembl ENSRNOP00000012796
Taxonomic identifier	10116 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	1134 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSRNOP00000012796

Ontologies

Keywords
Domain	Repeat SAAS SAAS001715
Ligand	Actin-binding SAAS SAAS001715
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	Ensembl ENSRNOP00000012796

Sequences

	Sequence		Length	Mass (Da)
	D3ZD13 [UniParc]. Last modified April 3, 2013. Version 2. Checksum: 505A63205A9B2BCD	FASTA	1,134	120,716
	10 20 30 40 50 60 VEPVDVVDNG DGTHTVTYTP SQEGPYIVSV KYADEEIPRS PFKVKVLPTY DASKVTASGP 70 80 90 100 110 120 GLSAYGVPAS LPVEFAIDAR DAGEGLLAVQ ITDQEGKPQR ATVHDNKDGT YAVTYIPDKT 130 140 150 160 170 180 GRYMIGVTYG GDNIPLSPYR IRATQTGDAS KCLATGPGIA PTVKTGEEVG FVVDAKTAGK 190 200 210 220 230 240 GKVTCVILTP DGTEAEADVI ENEDGTYDIF YTAAKPGTYV IYVRFGGVDI PNSPFTVMAK 250 260 270 280 290 300 EVRQHLHSRQ ISDEDTKTFR RVNDSFMTTG GFKLPYTSLT REVIPFAVRK GEITGQVHMP 310 320 330 340 350 360 SGKKATPEIV DNKDGTVTVR YAPTEVGLHE MHIKYMGSHI PESPLQFYVN YPNSGSVSAY 370 380 390 400 410 420 GPGLVYGVAN KTATFTIVTE DAGEGGLDLA IEGPSKAEIS CIDNKDGTCT VTYLPTLPGD 430 440 450 460 470 480 YSILVKYNDK HIPGSPFTAK ITDDSRRCSQ VKLGSAADFL LDISETDLST LTASIKAPSG 490 500 510 520 530 540 RDEPCLLKRL PNNHIGISFI PREVGEHLVS IKKNGNHVAN SPVSIMVVQS EIGDARRAKV 550 560 570 580 590 600 YGRGLSEGRT FEMSDFIVDT RDAGYGGISL AVEGPSKVDI QTEDLEDGTC KVSYFPTVPG 610 620 630 640 650 660 VYIVSTKFAD EHVPGSPFTV KISGEGRVKE SITRTSRAPS VATVGSICDL NLKIPEINSS 670 680 690 700 710 720 DMSAHVTSPS GHVTEAEIVP VGKNSHCVRF VPQEMGVHTV SVKYRGQHVT GSPFQFTVGP 730 740 750 760 770 780 LGEGGAHKVR AGGPGLERGE AGIPAEFSIW TREAGAGGLS IAVEGPSKAE ITFDDHKNGS 790 800 810 820 830 840 CGVSYIAQEP GNYEVSIKFN DEHIPDSPYL VPVIAPSDDA RCLTVLSLQE SGLKVNQPAS 850 860 870 880 890 900 FAIRLNGAKG KIDAKVHSPS GAVEECHVSE LEPDKYAVRF IPHENGIHTI DVKFNGSHVV 910 920 930 940 950 960 GSPFKVRVGE PGQAGNPALV SAYGAGLEAG TTGIQSEFFI NTTQAGPGTL SVTIEGPSKV 970 980 990 1000 1010 1020 KMDCQEIPEG YKVMYTPMAP GNYLISVKYG GPNHISRSPF KAKALGQRLV TPGSANETSS 1030 1040 1050 1060 1070 1080 ILVESVTRSS TETCYSAIPK SSSDASKVTS KGAGLSKAFV GQKSSFLVDC SKAGSNMLLI 1090 1100 1110 1120 1130 GVHGPTTPCE EVSMKHVGKQ QYNVTYVVKE KGDYVLAVKW GEEHIPGSPF HVTV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the Brown Norway rat yields insights into mammalian evolution." Rat Genome Sequencing Project Consortium Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S. Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Brown Norway Ensembl ENSRNOP00000012796.
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Brown Norway Ensembl ENSRNOP00000012796.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AABR06082292 Genomic DNA. No translation available.
IPI	IPI00373752.
3D structure databases
ProteinModelPortal	D3ZD13.
ModBase	Search...
PTM databases
PhosphoSite	D3ZD13.
Proteomic databases
PRIDE	D3ZD13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSRNOT00000012796; ENSRNOP00000012796; ENSRNOG00000050900.
Phylogenomic databases
GeneTree	ENSGT00660000095431.
OMA	HIMCDDE.
OrthoDB	EOG4V436R.
Gene expression databases
ArrayExpress	D3ZD13.
Family and domain databases
Gene3D	1.10.418.10. 2 hits. 2.60.40.10. 24 hits.
InterPro	IPR001589. Actinin_actin-bd_CS. IPR001715. CH-domain. IPR001298. Filamin. IPR017868. Filamin/ABP280_repeat-like. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Pfam	PF00307. CH. 2 hits. PF00630. Filamin. 23 hits. [Graphical view]
SMART	SM00033. CH. 2 hits. SM00557. IG_FLMN. 24 hits. [Graphical view]
SUPFAM	SSF47576. Calponin-homology. 1 hit. SSF81296. Ig_E-set. 24 hits.
PROSITE	PS00019. ACTININ_1. 1 hit. PS00020. ACTININ_2. 1 hit. PS50021. CH. 2 hits. PS50194. FILAMIN_REPEAT. 24 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	35566570.

Entry information

Entry name

D3ZD13_RAT

Accession

Primary (citable) accession number: D3ZD13

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 3, 2013
Last modified:	May 1, 2013
This is version 26 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)