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Protein
Submitted name:

Cytochrome c oxidase subunit 6B1

Gene

Cox6b1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome c oxidase subunit 6B1Imported
Gene namesi
Name:Cox6b1Imported
Synonyms:LOC681754Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1584097. Cox6b1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiD3ZD09.
PeptideAtlasiD3ZD09.

Expressioni

Gene expression databases

BgeeiENSRNOG00000024309.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000048723.

Structurei

3D structure databases

ProteinModelPortaliD3ZD09.
SMRiD3ZD09. Positions 8-86.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3057. Eukaryota.
ENOG41121WM. LUCA.
GeneTreeiENSGT00390000001191.
KOiK02267.
OMAiLDFHRCQ.
OrthoDBiEOG091G0UIB.
PhylomeDBiD3ZD09.
TreeFamiTF105065.

Family and domain databases

Gene3Di1.10.10.140. 1 hit.
InterProiIPR003213. Cyt_c_oxidase_su6B.
[Graphical view]
PfamiPF02297. COX6B. 1 hit.
[Graphical view]
PIRSFiPIRSF000278. Cyt_c_oxidase_6B. 1 hit.
SUPFAMiSSF47694. SSF47694. 1 hit.

Sequencei

Sequence statusi: Complete.

D3ZD09-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEDIKTKIK NYKTAPFDSR FPNQNQTKNC WQNYLDFHRC EKAMTAKGGD
60 70 80
VSVCEWYRRV YKSLCPVSWV SAWDDRIAEG TFPGKI
Length:86
Mass (Da):10,071
Last modified:April 20, 2010 - v1
Checksum:iA2E96D96CC37509A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC113756 Genomic DNA. No translation available.
RefSeqiNP_001138745.1. NM_001145273.1.
XP_006228857.1. XM_006228795.1.
UniGeneiRn.161837.

Genome annotation databases

EnsembliENSRNOT00000045155; ENSRNOP00000048723; ENSRNOG00000034161.
GeneIDi688869.
KEGGirno:688869.
UCSCiRGD:1584097. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC113756 Genomic DNA. No translation available.
RefSeqiNP_001138745.1. NM_001145273.1.
XP_006228857.1. XM_006228795.1.
UniGeneiRn.161837.

3D structure databases

ProteinModelPortaliD3ZD09.
SMRiD3ZD09. Positions 8-86.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000048723.

Proteomic databases

PaxDbiD3ZD09.
PeptideAtlasiD3ZD09.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000045155; ENSRNOP00000048723; ENSRNOG00000034161.
GeneIDi688869.
KEGGirno:688869.
UCSCiRGD:1584097. rat.

Organism-specific databases

RGDi1584097. Cox6b1.

Phylogenomic databases

eggNOGiKOG3057. Eukaryota.
ENOG41121WM. LUCA.
GeneTreeiENSGT00390000001191.
KOiK02267.
OMAiLDFHRCQ.
OrthoDBiEOG091G0UIB.
PhylomeDBiD3ZD09.
TreeFamiTF105065.

Gene expression databases

BgeeiENSRNOG00000024309.

Family and domain databases

Gene3Di1.10.10.140. 1 hit.
InterProiIPR003213. Cyt_c_oxidase_su6B.
[Graphical view]
PfamiPF02297. COX6B. 1 hit.
[Graphical view]
PIRSFiPIRSF000278. Cyt_c_oxidase_6B. 1 hit.
SUPFAMiSSF47694. SSF47694. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZD09_RAT
AccessioniPrimary (citable) accession number: D3ZD09
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 7, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.