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Protein
Submitted name:

Peroxisomal biogenesis factor 10

Gene

Pex10

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Peroxisomal biogenesis factor 10Imported
Submitted name:
RCG31325Imported
Gene namesi
Name:Pex10Imported
ORF Names:rCG_31325Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi1591776. Pex10.

Subcellular locationi

GO - Cellular componenti

  • integral component of peroxisomal membrane Source: InterPro
  • peroxisomal membrane Source: RGD

Expressioni

Gene expression databases

BgeeiENSRNOG00000024012.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000031473.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini271 – 309RING-typeInterPro annotationAdd BLAST39

Phylogenomic databases

eggNOGiKOG0317. Eukaryota.
COG5574. LUCA.
GeneTreeiENSGT00510000048446.
KOiK13346.
OMAiIYLRHYR.
OrthoDBiEOG091G0IDS.
TreeFamiTF326491.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR025654. PEX10.
IPR006845. Pex_N.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
PANTHERiPTHR23350. PTHR23350. 1 hit.
PfamiView protein in Pfam
PF04757. Pex2_Pex12. 1 hit.
SMARTiView protein in SMART
SM00184. RING. 1 hit.
PROSITEiView protein in PROSITE
PS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.

Sequencei

Sequence statusi: Complete.

D3ZC81-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQAGPPEVI RAAQKDEYYL GGLRSAAGGA LHSLAGAKKW LEWRKEIELL
60 70 80 90 100
SDIAYFGLTT IAGYQTLGEE YVGIIQVDPS RQRVPSRLRR GVLVALHAVL
110 120 130 140 150
PYLLDKALLP LEQELQAEGD GTRASQGSLL PGGRSRSGAR RWVRHHAATL
160 170 180 190 200
TEQQRRALQR AVFILRQGFA CLHRLHVAWF YIHGTFYHLA KRLAGITYLR
210 220 230 240 250
TRRLPGEDLR ACTSYRLLGL ISLLHLALSL GLQLYSFRQK QRARKEWRLH
260 270 280 290 300
RNLSHRRSSL EDRAVCRAPL CTLCLEERRH STATPCGHLF CWECITEWCN
310 320
TKTECPLCRE KFPPQKLVYL RHYR
Length:324
Mass (Da):37,112
Last modified:April 20, 2010 - v1
Checksum:i427BCA334F32A21E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134160 Genomic DNA. No translation available.
CH473968 Genomic DNA. Translation: EDL81284.1.
RefSeqiNP_001102875.1. NM_001109405.1.
UniGeneiRn.111.

Genome annotation databases

EnsembliENSRNOT00000036819; ENSRNOP00000031473; ENSRNOG00000024012.
GeneIDi680424.
KEGGirno:680424.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134160 Genomic DNA. No translation available.
CH473968 Genomic DNA. Translation: EDL81284.1.
RefSeqiNP_001102875.1. NM_001109405.1.
UniGeneiRn.111.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000031473.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000036819; ENSRNOP00000031473; ENSRNOG00000024012.
GeneIDi680424.
KEGGirno:680424.

Organism-specific databases

CTDi5192.
RGDi1591776. Pex10.

Phylogenomic databases

eggNOGiKOG0317. Eukaryota.
COG5574. LUCA.
GeneTreeiENSGT00510000048446.
KOiK13346.
OMAiIYLRHYR.
OrthoDBiEOG091G0IDS.
TreeFamiTF326491.

Gene expression databases

BgeeiENSRNOG00000024012.

Family and domain databases

Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR025654. PEX10.
IPR006845. Pex_N.
IPR001841. Znf_RING.
IPR013083. Znf_RING/FYVE/PHD.
IPR017907. Znf_RING_CS.
PANTHERiPTHR23350. PTHR23350. 1 hit.
PfamiView protein in Pfam
PF04757. Pex2_Pex12. 1 hit.
SMARTiView protein in SMART
SM00184. RING. 1 hit.
PROSITEiView protein in PROSITE
PS00518. ZF_RING_1. 1 hit.
PS50089. ZF_RING_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZC81_RAT
AccessioniPrimary (citable) accession number: D3ZC81
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: March 15, 2017
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.