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D3ZAX5

- D3ZAX5_RAT

UniProt

D3ZAX5 - D3ZAX5_RAT

Protein
Submitted name:

Calcium homeostasis endoplasmic reticulum protein (Predicted)

Gene

Cherp

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 36 (01 Oct 2014)
      Sequence version 2 (03 Apr 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro

    GO - Biological processi

    1. negative regulation of cell proliferation Source: Ensembl
    2. positive regulation of NFAT protein import into nucleus Source: Ensembl
    3. release of sequestered calcium ion into cytosol Source: Ensembl
    4. RNA processing Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Calcium homeostasis endoplasmic reticulum protein (Predicted)Imported
    Submitted name:
    Protein CherpImported
    Gene namesi
    Name:CherpImported
    Synonyms:Cherp_predictedImported
    ORF Names:rCG_38856Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 16

    Organism-specific databases

    RGDi1305279. Cherp.

    Subcellular locationi

    GO - Cellular componenti

    1. perinuclear region of cytoplasm Source: Ensembl
    2. sarcoplasmic reticulum membrane Source: UniProtKB

    Family & Domainsi

    Sequence similaritiesi

    Contains G-patch domain.SAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00730000111147.
    KOiK12841.
    OMAiAEMGPPH.
    OrthoDBiEOG7H1JK4.
    TreeFamiTF318512.

    Family and domain databases

    Gene3Di1.25.40.90. 1 hit.
    InterProiIPR006569. CID_dom.
    IPR008942. ENTH_VHS.
    IPR000467. G_patch_dom.
    IPR006903. RNA_pol_II-bd.
    IPR000061. Surp.
    [Graphical view]
    PfamiPF04818. CTD_bind. 1 hit.
    PF01585. G-patch. 1 hit.
    PF01805. Surp. 1 hit.
    [Graphical view]
    SMARTiSM00443. G_patch. 1 hit.
    SM00582. RPR. 1 hit.
    SM00648. SWAP. 1 hit.
    [Graphical view]
    SUPFAMiSSF109905. SSF109905. 1 hit.
    SSF48464. SSF48464. 1 hit.
    PROSITEiPS51391. CID. 1 hit.
    PS50174. G_PATCH. 1 hit.
    PS50128. SURP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3ZAX5-1 [UniParc]FASTAAdd to Basket

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    MEMPLPPDDQ ELRNVIDKLA QFVARNGPEF EKMTMEKQKD NPKFSFLFGG    50
    EFYSYYKCKL ALEQQQLICK QQAPELEPTS AMPPLPQPPL APTASLTPAQ 100
    GTPSMDELIQ QSQWSLQQQE QHLLALRQEQ VTTAVAHAVE QQMQKLLEET 150
    QLDMSEFDNL LQPIIDTCTK DAISAGKNWM FSNAKSPPHC ELMAGHLRNR 200
    ITADGAHFEL RLHLIYLIND VLHHCQRKQA RELLAALQKV VVPIYCTSFL 250
    AVEEDKQQKI ARLLQLWEKN GYFDDSIIQQ LQSPALGLGQ YQATLINEYS 300
    SVVQPVQLAF QQQIQSLKTQ HEEFVSSLAQ QQQQQQQQQQ PPQQPPQPQI 350
    QLPPMEADVK ATPPPSAPPP ASAPAPTIPP TTQPDDNKPP IQMPGSSEYD 400
    TSAGVQDPAA AGPRGPGPHE QIPPNKPPWF DQPHPVAPWG QQQPPEQPPY 450
    PHHQGGPPHC PPWNNSHEGM WGEQRGDPGW NGQRDAPWNN QPDPNWNNQF 500
    EGPWNNQHEP PPWGGAQREP PFRMQRPPHF RGPFPPHQQH PQFNQPPHPH 550
    NFNRFPPRFM QDDFPPRHPF ERPPYPHRFD YPQGDFPADM GPPHHHPGHR 600
    MPHPGINEHP PWAGPQHPDF GPPPHGFNGQ PPHMRRQGPP HINHDDPSLV 650
    PNVPYFDLPA GLMAPLVKLE DHEYKPLDPK DIRLPPPMPP SERLLAAVEA 700
    FYSPPSHDRP RNSEGWEQNG LYEFFRAKMR ARRRKGQEKR NSGPSRSHSR 750
    SKSRGRSSSR SSSRSSKSSR SSSRSRSRSR SRSSSRSRSR SRSRSRSSRS 800
    RSRSRSRSRS KSYSPGRRRR SRSRSPTPPS AAGLGSNSAP PIPDSRLGEE 850
    NKGHQMLVKM GWSGSGGLGA KEQGIQDPIK GGDVRDKWDQ YKGVGVALDD 900
    PYENYRRNKS YSFIARMKAR DEFSTFGARK EEKED 935
    Length:935
    Mass (Da):105,920
    Last modified:April 3, 2013 - v2
    Checksum:i79DAE80A0D018C5A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06086810 Genomic DNA. No translation available.
    CH474031 Genomic DNA. Translation: EDL90845.1.
    RefSeqiNP_001099534.1. NM_001106064.1.
    UniGeneiRn.85949.

    Genome annotation databases

    EnsembliENSRNOT00000017424; ENSRNOP00000017424; ENSRNOG00000012323.
    GeneIDi290614.
    KEGGirno:290614.
    UCSCiRGD:1305279. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06086810 Genomic DNA. No translation available.
    CH474031 Genomic DNA. Translation: EDL90845.1 .
    RefSeqi NP_001099534.1. NM_001106064.1.
    UniGenei Rn.85949.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000017424 ; ENSRNOP00000017424 ; ENSRNOG00000012323 .
    GeneIDi 290614.
    KEGGi rno:290614.
    UCSCi RGD:1305279. rat.

    Organism-specific databases

    CTDi 10523.
    RGDi 1305279. Cherp.

    Phylogenomic databases

    GeneTreei ENSGT00730000111147.
    KOi K12841.
    OMAi AEMGPPH.
    OrthoDBi EOG7H1JK4.
    TreeFami TF318512.

    Miscellaneous databases

    NextBioi 35566090.

    Family and domain databases

    Gene3Di 1.25.40.90. 1 hit.
    InterProi IPR006569. CID_dom.
    IPR008942. ENTH_VHS.
    IPR000467. G_patch_dom.
    IPR006903. RNA_pol_II-bd.
    IPR000061. Surp.
    [Graphical view ]
    Pfami PF04818. CTD_bind. 1 hit.
    PF01585. G-patch. 1 hit.
    PF01805. Surp. 1 hit.
    [Graphical view ]
    SMARTi SM00443. G_patch. 1 hit.
    SM00582. RPR. 1 hit.
    SM00648. SWAP. 1 hit.
    [Graphical view ]
    SUPFAMi SSF109905. SSF109905. 1 hit.
    SSF48464. SSF48464. 1 hit.
    PROSITEi PS51391. CID. 1 hit.
    PS50174. G_PATCH. 1 hit.
    PS50128. SURP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    3. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: BNImported.
    4. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3ZAX5_RAT
    AccessioniPrimary (citable) accession number: D3ZAX5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 3, 2013
    Last modified: October 1, 2014
    This is version 36 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3