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D3ZAX5

- D3ZAX5_RAT

UniProt

D3ZAX5 - D3ZAX5_RAT

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Protein
Submitted name: Calcium homeostasis endoplasmic reticulum protein (Predicted)
Gene
Cherp, Cherp_predicted, rCG_38856
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro

GO - Biological processi

  1. RNA processing Source: InterPro
  2. negative regulation of cell proliferation Source: Ensembl
  3. positive regulation of NFAT protein import into nucleus Source: Ensembl
  4. release of sequestered calcium ion into cytosol Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Calcium homeostasis endoplasmic reticulum protein (Predicted)Imported
Submitted name:
Protein CherpImported
Gene namesi
Name:CherpImported
Synonyms:Cherp_predictedImported
ORF Names:rCG_38856Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 16

Organism-specific databases

RGDi1305279. Cherp.

Subcellular locationi

GO - Cellular componenti

  1. perinuclear region of cytoplasm Source: Ensembl
  2. sarcoplasmic reticulum membrane Source: UniProtKB
Complete GO annotation...

Family & Domainsi

Sequence similaritiesi

Contains G-patch domain.SAAS annotations

Phylogenomic databases

GeneTreeiENSGT00730000111147.
KOiK12841.
OMAiAEMGPPH.
OrthoDBiEOG7H1JK4.
TreeFamiTF318512.

Family and domain databases

Gene3Di1.25.40.90. 1 hit.
InterProiIPR006569. CID_dom.
IPR008942. ENTH_VHS.
IPR000467. G_patch_dom.
IPR006903. RNA_pol_II-bd.
IPR000061. Surp.
[Graphical view]
PfamiPF04818. CTD_bind. 1 hit.
PF01585. G-patch. 1 hit.
PF01805. Surp. 1 hit.
[Graphical view]
SMARTiSM00443. G_patch. 1 hit.
SM00582. RPR. 1 hit.
SM00648. SWAP. 1 hit.
[Graphical view]
SUPFAMiSSF109905. SSF109905. 1 hit.
SSF48464. SSF48464. 1 hit.
PROSITEiPS51391. CID. 1 hit.
PS50174. G_PATCH. 1 hit.
PS50128. SURP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3ZAX5-1 [UniParc]FASTAAdd to Basket

« Hide

MEMPLPPDDQ ELRNVIDKLA QFVARNGPEF EKMTMEKQKD NPKFSFLFGG    50
EFYSYYKCKL ALEQQQLICK QQAPELEPTS AMPPLPQPPL APTASLTPAQ 100
GTPSMDELIQ QSQWSLQQQE QHLLALRQEQ VTTAVAHAVE QQMQKLLEET 150
QLDMSEFDNL LQPIIDTCTK DAISAGKNWM FSNAKSPPHC ELMAGHLRNR 200
ITADGAHFEL RLHLIYLIND VLHHCQRKQA RELLAALQKV VVPIYCTSFL 250
AVEEDKQQKI ARLLQLWEKN GYFDDSIIQQ LQSPALGLGQ YQATLINEYS 300
SVVQPVQLAF QQQIQSLKTQ HEEFVSSLAQ QQQQQQQQQQ PPQQPPQPQI 350
QLPPMEADVK ATPPPSAPPP ASAPAPTIPP TTQPDDNKPP IQMPGSSEYD 400
TSAGVQDPAA AGPRGPGPHE QIPPNKPPWF DQPHPVAPWG QQQPPEQPPY 450
PHHQGGPPHC PPWNNSHEGM WGEQRGDPGW NGQRDAPWNN QPDPNWNNQF 500
EGPWNNQHEP PPWGGAQREP PFRMQRPPHF RGPFPPHQQH PQFNQPPHPH 550
NFNRFPPRFM QDDFPPRHPF ERPPYPHRFD YPQGDFPADM GPPHHHPGHR 600
MPHPGINEHP PWAGPQHPDF GPPPHGFNGQ PPHMRRQGPP HINHDDPSLV 650
PNVPYFDLPA GLMAPLVKLE DHEYKPLDPK DIRLPPPMPP SERLLAAVEA 700
FYSPPSHDRP RNSEGWEQNG LYEFFRAKMR ARRRKGQEKR NSGPSRSHSR 750
SKSRGRSSSR SSSRSSKSSR SSSRSRSRSR SRSSSRSRSR SRSRSRSSRS 800
RSRSRSRSRS KSYSPGRRRR SRSRSPTPPS AAGLGSNSAP PIPDSRLGEE 850
NKGHQMLVKM GWSGSGGLGA KEQGIQDPIK GGDVRDKWDQ YKGVGVALDD 900
PYENYRRNKS YSFIARMKAR DEFSTFGARK EEKED 935
Length:935
Mass (Da):105,920
Last modified:April 3, 2013 - v2
Checksum:i79DAE80A0D018C5A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06086810 Genomic DNA. No translation available.
CH474031 Genomic DNA. Translation: EDL90845.1.
RefSeqiNP_001099534.1. NM_001106064.1.
UniGeneiRn.85949.

Genome annotation databases

EnsembliENSRNOT00000017424; ENSRNOP00000017424; ENSRNOG00000012323.
GeneIDi290614.
KEGGirno:290614.
UCSCiRGD:1305279. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06086810 Genomic DNA. No translation available.
CH474031 Genomic DNA. Translation: EDL90845.1 .
RefSeqi NP_001099534.1. NM_001106064.1.
UniGenei Rn.85949.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000017424 ; ENSRNOP00000017424 ; ENSRNOG00000012323 .
GeneIDi 290614.
KEGGi rno:290614.
UCSCi RGD:1305279. rat.

Organism-specific databases

CTDi 10523.
RGDi 1305279. Cherp.

Phylogenomic databases

GeneTreei ENSGT00730000111147.
KOi K12841.
OMAi AEMGPPH.
OrthoDBi EOG7H1JK4.
TreeFami TF318512.

Miscellaneous databases

NextBioi 35566090.

Family and domain databases

Gene3Di 1.25.40.90. 1 hit.
InterProi IPR006569. CID_dom.
IPR008942. ENTH_VHS.
IPR000467. G_patch_dom.
IPR006903. RNA_pol_II-bd.
IPR000061. Surp.
[Graphical view ]
Pfami PF04818. CTD_bind. 1 hit.
PF01585. G-patch. 1 hit.
PF01805. Surp. 1 hit.
[Graphical view ]
SMARTi SM00443. G_patch. 1 hit.
SM00582. RPR. 1 hit.
SM00648. SWAP. 1 hit.
[Graphical view ]
SUPFAMi SSF109905. SSF109905. 1 hit.
SSF48464. SSF48464. 1 hit.
PROSITEi PS51391. CID. 1 hit.
PS50174. G_PATCH. 1 hit.
PS50128. SURP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: BNImported.
  4. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3ZAX5_RAT
AccessioniPrimary (citable) accession number: D3ZAX5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: September 3, 2014
This is version 35 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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