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Protein
Submitted name:

Transcription factor-binding to IGHM enhancer 3

Gene

Tfe3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor-binding to IGHM enhancer 3Imported
Gene namesi
Name:Tfe3Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome X

Organism-specific databases

RGDi1559642 Tfe3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiD3ZAW6
PeptideAtlasiD3ZAW6

PTM databases

iPTMnetiD3ZAW6
PhosphoSitePlusiD3ZAW6

Expressioni

Gene expression databases

BgeeiENSRNOG00000009605
GenevisibleiD3ZAW6 RN

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000012830

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini345 – 398BHLHInterPro annotationAdd BLAST54

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili398 – 432Sequence analysisAdd BLAST35

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1318 Eukaryota
ENOG410ZYYV LUCA
GeneTreeiENSGT00390000004402
InParanoidiD3ZAW6
KOiK09105
OMAiPGTATFH
OrthoDBiEOG091G0QCO
PhylomeDBiD3ZAW6
TreeFamiTF317174

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR021802 MiT/TFE_C
IPR031867 MiT/TFE_N
IPR024100 TFE3
PANTHERiPTHR12565:SF163 PTHR12565:SF163, 1 hit
PfamiView protein in Pfam
PF11851 DUF3371, 1 hit
PF00010 HLH, 1 hit
PF15951 MITF_TFEB_C_3_N, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZAW6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSHATETARD GVEASAEGPR AVFVLLEERR PADSAQLLSL NSLLPESGIV
60 70 80 90 100
ADIELENILD PDSFYELKSQ PLSLRSSLPI SLQATPTTPA TLSASSSAGG
110 120 130 140 150
SRTPAMSSSS SRVLLRQQLM RAQAQEQERR ERREQAAAAP FPSPAPASPA
160 170 180 190 200
ISVIGVSAGG HTLSRPPPAQ VPREVLKVQT HLENPTRYHL QQARRQQVKQ
210 220 230 240 250
YLSTTLGPKL ASQALTPPPG PSSAQPLPAP ETAHATGPTG SAPNSPMALL
260 270 280 290 300
TIGSSSEKEI DDVIDEIISL ESSYNDEMLS YLPGGTAGLQ LPSTLPVSGN
310 320 330 340 350
LLDVYSSQGV ATPAITVSNS CPAELPNIKR EISETEAKAL LKERQKKDNH
360 370 380 390 400
NLIERRRRFN INDRIKELGT LIPKSNDPEM RWNKGTILKA SVDYIRKLQK
410 420 430 440 450
EQQRSKDLES RQRSLEQANR SLQLRIQELE LQAQIHGLPV PPNPGLLSLA
460 470 480 490 500
TSSVSDSLKP EQLDIEEEGR PSTTTFHVSG GPTQNAPPQQ PPAPPSDTLL
510 520 530 540 550
DLHFPSDHLG DLGDPFHLGL EDILMEEEGM VGGLSGGALS PLRAASDPLL
560 570
SSVSPAVSKS SSRRSSFSME DES
Length:573
Mass (Da):61,601
Last modified:April 20, 2010 - v1
Checksum:i8193E836528D23CB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC130624 Genomic DNA No translation available.
RefSeqiNP_001258156.1, NM_001271227.1
UniGeneiRn.9231

Genome annotation databases

EnsembliENSRNOT00000012829; ENSRNOP00000012830; ENSRNOG00000009605
GeneIDi317376
KEGGirno:317376

Similar proteinsi

Entry informationi

Entry nameiD3ZAW6_RAT
AccessioniPrimary (citable) accession number: D3ZAW6
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 23, 2018
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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