D3ZAS8 (D3ZAS8_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein Sart3 Ensembl ENSRNOP00000000891

Submitted name:
Squamous cell carcinoma antigen recognized by T-cells 3 (Predicted) EMBL EDM13966.1

Gene names

Name:	Sart3 Ensembl ENSRNOP00000000891 RGD 1311646
Synonyms:	Sart3_predicted EMBL EDM13966.1
ORF Names:	rCG_21169 EMBL EDM13966.1

Organism

Rattus norvegicus (Rat) [Reference proteome] Ensembl ENSRNOP00000000891

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	960 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	RNA processing Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: Compara intracellular membrane-bounded organelle Inferred from electronic annotation. Source: Compara
Molecular_function	nucleic acid binding Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3ZAS8 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: 1D6E9BC6B4009B7D	FASTA	960	109,424
	10 20 30 40 50 60 MATATASSAS EPEVEPQARP EAEGEEDEAK PAGVGRKVLS SAETAKAKGP EREVHQEGVS 70 80 90 100 110 120 ESDGDEEDAA MASSAESSAG EDEWEYDEEE EKNQLEIERL EEQLSINGYD YNCHVGLIRL 130 140 150 160 170 180 LRLEGELNKV RMARQKMSEI FPLTEELWLE WLHDEISMAV DGLDRERVYE LFERAVKDYI 190 200 210 220 230 240 CPNIWLEYGQ YSVGGIGQKG GLEKVRSVFE RALSSVGLHM TKGLAIWEAY REFESAIVEA 250 260 270 280 290 300 ARLERVHSLF RRQLAIPLYE MEATFAEYEE WSEEPIPESV LQSYQKALGQ LEKYKPYEEA 310 320 330 340 350 360 LLQAEAPRLA EYQAYIDFEM KVGDPARIQL IFERALVENC LVPDLWIRYS QYLDRQLKVK 370 380 390 400 410 420 DLVLSVHSRA VRNCPWTVAL WSRYLLAMER HGLDHQMISA TFENALSAGF IQATDYVEIW 430 440 450 460 470 480 QVYLDYLRRR VDFRQDSSKE LEELRSMFTR ALEYLQQEVE ERFSESGDPS CLIMQSWARV 490 500 510 520 530 540 EARLCNNMQK ARELWDSIMT RGNAKYANMW LEYYNLERAH GDTQHCRKAL HRAVQCTSDY 550 560 570 580 590 600 PEHVCEVLLT MERTEGTLED WDLAIQKTET RLARVNEQRM KAAEKEAALV QQEEEKAEQR 610 620 630 640 650 660 KKVRAEKKAL KKKKTRGADK RKAGEDDDER ECGEEEEEQP SKRRRMENSL ASGVASAKEE 670 680 690 700 710 720 ETKLSGKCLT IDVAPPSKQK EKAASLKRDM PKVAHDSSKD SVTVFVSNLP YSIEEPEVKL 730 740 750 760 770 780 RPLFEACGEV VQIRPIFSNR GDFRGYCYVE FKEEKSAQQA LDLDRKNVEG RPMFVSPCVD 790 800 810 820 830 840 KSKNPDFKMF RYSTTLEKHK LFISGLPFSC TKEELEGICK AHGTVKDLRL VTNRAGKPKG 850 860 870 880 890 900 LAYVEYENES QASQAVLKMD GMTIKENVIK VAISNPPQRK VPEKPEVRTA PGAPMVPRQM 910 920 930 940 950 960 YGARGKGRTQ LSLLPRALQR QGAAPQAENG PAPGLAATTS VATEAPKMSN ADFAKLLLRK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of the Brown Norway rat yields insights into mammalian evolution." Rat Genome Sequencing Project Consortium Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M. , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S. Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Brown Norway Ensembl ENSRNOP00000000891.
[2]	"Gene and alternative splicing annotation with AIR." Florea L., Di Francesco V., Miller J., Turner R., Yao A., Harris M., Walenz B., Mobarry C., Merkulov G.V., Charlab R., Dew I., Deng Z., Istrail S., Li P., Sutton G. Genome Res. 15:54-66(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: BN EMBL EDM13966.1.
[3]	Mural R.J., Li P.W., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S.H., Dew I., Evans C.A., Ferriera S., Flanigan M., Fosler C., Glodek A., Gu Z., Holt R.A., Jennings D., Kraft C.L., Lu F. , Nguyen T., Nusskern D.R., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Wang Z., Woodage T., Zheng X.H., Zhong F. Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: BN EMBL EDM13966.1.
[4]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Brown Norway Ensembl ENSRNOP00000000891.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AABR06072530 Genomic DNA. No translation available. AABR06072531 Genomic DNA. No translation available. CH473973 Genomic DNA. Translation: EDM13966.1.
IPI	IPI00371231.
RefSeq	NP_001100626.1. NM_001107156.1.
UniGene	Rn.101480.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSRNOT00000000891; ENSRNOP00000000891; ENSRNOG00000000702.
GeneID	304582.
KEGG	rno:304582.
UCSC	RGD:1311646. rat.
Organism-specific databases
CTD	9733.
RGD	1311646. Sart3.
Phylogenomic databases
GeneTree	ENSGT00550000074656.
OMA	SQAVMKM.
OrthoDB	EOG4RXXZG.
Family and domain databases
Gene3D	3.30.70.330. 2 hits.
InterPro	IPR003107. HAT. IPR008669. LSM_interact. IPR012677. Nucleotide-bd_a/b_plait. IPR000504. RRM_dom. [Graphical view]
Pfam	PF05391. Lsm_interact. 1 hit. PF00076. RRM_1. 2 hits. [Graphical view]
SMART	SM00386. HAT. 7 hits. SM00360. RRM. 2 hits. [Graphical view]
PROSITE	PS50102. RRM. 2 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	653335.

Entry information

Entry name

D3ZAS8_RAT

Accession

Primary (citable) accession number: D3ZAS8

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	April 3, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)