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Protein

Hexosyltransferase

Gene

B3galnt2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosyltransferaseUniRule annotationSAAS annotation, Transferase

Enzyme and pathway databases

ReactomeiR-RNO-5173105. O-linked glycosylation.

Names & Taxonomyi

Protein namesi
Recommended name:
HexosyltransferaseUniRule annotation (EC:2.4.1.-UniRule annotation)
Gene namesi
Name:B3galnt2Imported
ORF Names:rCG_45286Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 17

Organism-specific databases

RGDi1306946. B3galnt2.

Subcellular locationi

  • Golgi apparatus membrane UniRule annotation; Single-pass type II membrane protein UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Golgi apparatusUniRule annotationSAAS annotation, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 16Sequence analysisAdd BLAST16
ChainiPRO_500816100317 – 504HexosyltransferaseSequence analysisAdd BLAST488

Expressioni

Gene expression databases

BgeeiENSRNOG00000016855.
ExpressionAtlasiD3Z9C4. differential.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000022924.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 31 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiKOG2287. Eukaryota.
ENOG410ZZ1B. LUCA.
GeneTreeiENSGT00530000063810.
KOiK09654.
OMAiFYRWTVE.
OrthoDBiEOG091G0TUV.
PhylomeDBiD3Z9C4.
TreeFamiTF314311.

Family and domain databases

InterProiIPR002659. Glyco_trans_31.
[Graphical view]
PANTHERiPTHR11214. PTHR11214. 2 hits.
PfamiPF01762. Galactosyl_T. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3Z9C4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNWLVLLCP CVLGAALHLW HLWLRSPPAP HNTEPSAADQ SALFPQGKFR
60 70 80 90 100
HYDVVVGVLS ARNNHELRNV IRNTWLKDLL QHPTLSQRVL VKFIIGARGC
110 120 130 140 150
DVPVEDREDP YSCRLLNITS PVLNQEIEAF SFPEDASSSR LSEDRVVSVS
160 170 180 190 200
FRVLYPIVIT SVGVFYDASD IGFQRNITVK LYQTEQEEAL FVARFSPPSC
210 220 230 240 250
GTQVNKLWYK PVEQFILPES FEGTIVWESQ DLHGLVSRNL HRVTVNDGGG
260 270 280 290 300
VLRVLTAGEG ALPHEFMEGV EGVAGGFIYT VQEGDALLRS LYSRPQRLVD
310 320 330 340 350
HIRDLQVEDA LLQKESSIYD DIVFVDVVDT YRNVPAKLLN FYRWTVESTS
360 370 380 390 400
FSLLLKTDDD CYIDLEAVFN RIAQKNLDGP NFWWGNFRLN WAVDRTGKWQ
410 420 430 440 450
ELEYPSPAYP AFACGSGYVI SKDIVDWLAG NSGRLKTYQG EDVSMGIWMA
460 470 480 490 500
AIGPKRHQDS LWLCEKTCET GMLSSPQYSP EELSKLWGLK ELCGDPCQCE

AKAR
Length:504
Mass (Da):57,015
Last modified:April 20, 2010 - v1
Checksum:i8DCAEBCACBF4E460
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07072554 Genomic DNA. No translation available.
AC114215 Genomic DNA. No translation available.
CH474030 Genomic DNA. Translation: EDL87430.1.
CH474030 Genomic DNA. Translation: EDL87431.1.
RefSeqiNP_001138323.1. NM_001144851.1.
UniGeneiRn.140763.

Genome annotation databases

EnsembliENSRNOT00000022924; ENSRNOP00000022924; ENSRNOG00000016855.
GeneIDi291212.
KEGGirno:291212.
UCSCiRGD:1306946. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07072554 Genomic DNA. No translation available.
AC114215 Genomic DNA. No translation available.
CH474030 Genomic DNA. Translation: EDL87430.1.
CH474030 Genomic DNA. Translation: EDL87431.1.
RefSeqiNP_001138323.1. NM_001144851.1.
UniGeneiRn.140763.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000022924.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000022924; ENSRNOP00000022924; ENSRNOG00000016855.
GeneIDi291212.
KEGGirno:291212.
UCSCiRGD:1306946. rat.

Organism-specific databases

CTDi148789.
RGDi1306946. B3galnt2.

Phylogenomic databases

eggNOGiKOG2287. Eukaryota.
ENOG410ZZ1B. LUCA.
GeneTreeiENSGT00530000063810.
KOiK09654.
OMAiFYRWTVE.
OrthoDBiEOG091G0TUV.
PhylomeDBiD3Z9C4.
TreeFamiTF314311.

Enzyme and pathway databases

ReactomeiR-RNO-5173105. O-linked glycosylation.

Gene expression databases

BgeeiENSRNOG00000016855.
ExpressionAtlasiD3Z9C4. differential.

Family and domain databases

InterProiIPR002659. Glyco_trans_31.
[Graphical view]
PANTHERiPTHR11214. PTHR11214. 2 hits.
PfamiPF01762. Galactosyl_T. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD3Z9C4_RAT
AccessioniPrimary (citable) accession number: D3Z9C4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 30, 2016
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.