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D3Z962

- D3Z962_RAT

UniProt

D3Z962 - D3Z962_RAT

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Protein
Submitted name: Protein Tacc3
Gene
Tacc3
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Biological processi

  1. astral microtubule organization Source: Ensembl
  2. cerebral cortex development Source: Ensembl
  3. cytoplasmic sequestering of transcription factor Source: Ensembl
  4. hemopoiesis Source: Ensembl
  5. interkinetic nuclear migration Source: Ensembl
  6. neurogenesis Source: Ensembl
  7. regulation of cell cycle Source: Ensembl
  8. regulation of microtubule-based process Source: Ensembl
  9. response to hypoxia Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Tacc3Imported
Gene namesi
Name:Tacc3Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 14

Organism-specific databases

RGDi1302948. Tacc3.

Subcellular locationi

GO - Cellular componenti

  1. centrosome Source: Ensembl
  2. cytoplasm Source: Ensembl
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063855.
OMAiLEPSHQG.
OrthoDBiEOG7HB58V.
TreeFamiTF333149.

Family and domain databases

InterProiIPR007707. TACC.
[Graphical view]
PANTHERiPTHR13924. PTHR13924. 1 hit.
PfamiPF05010. TACC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3Z962-1 [UniParc]FASTAAdd to Basket

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MSLHILTDEN VPNEKSSESR DFLFSAPELT GRSSVLRLSQ KENVPPKNQA    50
KAAKVTFQTP LRDPQTHRIL SPNMTSKLEA PFALDDSVGL QNDHCVFLQK 100
ENQLPVAPVD DVPVVQMAAE ILKAEDELQE GILNSLSPSA FTSFPDGELV 150
TPPIEPMPEP SPQGPEPLLD SEPVTPPVKP VLEPTPQGPE PLLDSEPVTP 200
PVKPVLEPTP QGSEPLLDSE PVTLPVEPVP ESSHQGPEPL LDSEPVTLPV 250
EPVPESSHQG PEPLLDPKEE SFRDPAEVLG AGAEVDYLEQ FGTSSFKESA 300
WRKQSLYLKF DPLLKESPLR SMPVPVAPVT NSTQDTEESG SGNPTEAKLV 350
DLDFLGGLDV PVSAPPLCVL EPRGLLPAEP IVDVLKYSQK DLDAVVMQQE 400
NLELRNKYED LNTKYLEMGR SLMDLRRSCI SMEEAEKQKE LAEDKIQKIL 450
RERDQLTADL NSMEKSFSDL FKRFEKQKEV IEGYQKNEDS LKKCVEDYIV 500
KIGKEGQRYQ ALKAHAEEKL KMANEEIAQV RSKAQAEALA LQASLRKAQL 550
QIQSLEKTVE QKTKENDELN RICDELIAKM EKKI 584
Length:584
Mass (Da):64,875
Last modified:April 3, 2013 - v2
Checksum:iD249E205B632F412
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06080196 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000032972; ENSRNOP00000034933; ENSRNOG00000017259.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AABR06080196 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000032972 ; ENSRNOP00000034933 ; ENSRNOG00000017259 .

Organism-specific databases

RGDi 1302948. Tacc3.

Phylogenomic databases

GeneTreei ENSGT00530000063855.
OMAi LEPSHQG.
OrthoDBi EOG7HB58V.
TreeFami TF333149.

Miscellaneous databases

NextBioi 35565707.

Family and domain databases

InterProi IPR007707. TACC.
[Graphical view ]
PANTHERi PTHR13924. PTHR13924. 1 hit.
Pfami PF05010. TACC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3Z962_RAT
AccessioniPrimary (citable) accession number: D3Z962
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: March 19, 2014
This is version 25 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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