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Protein
Submitted name:

Protein Tacc3

Gene

Tacc3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. astral microtubule organization Source: Ensembl
  2. cell proliferation Source: GO_Central
  3. cerebral cortex development Source: GO_Central
  4. cytoplasmic sequestering of transcription factor Source: Ensembl
  5. hemopoiesis Source: Ensembl
  6. interkinetic nuclear migration Source: Ensembl
  7. microtubule cytoskeleton organization Source: GO_Central
  8. neurogenesis Source: Ensembl
  9. regulation of cell cycle Source: Ensembl
  10. regulation of microtubule-based process Source: Ensembl
  11. response to hypoxia Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein Tacc3Imported
Gene namesi
Name:Tacc3Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 14

Organism-specific databases

RGDi1302948. Tacc3.

Subcellular locationi

GO - Cellular componenti

  1. centrosome Source: Ensembl
  2. cytoplasm Source: GO_Central
  3. microtubule cytoskeleton Source: GO_Central
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00530000063855.
InParanoidiD3Z962.
OMAiHQGLEPV.
OrthoDBiEOG7HB58V.
TreeFamiTF333149.

Family and domain databases

InterProiIPR007707. TACC.
[Graphical view]
PANTHERiPTHR13924. PTHR13924. 1 hit.
PfamiPF05010. TACC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3Z962-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSLHILTDEN VPNEKSSESR DFLFSAPELT GRSSVLRLSQ KENVPPKNQA
60 70 80 90 100
KAAKVTFQTP LRDPQTHRIL SPNMTSKLEA PFALDDSVGL QNDHCVFLQK
110 120 130 140 150
ENQLPVAPVD DVPVVQMAAE ILKAEDELQE GILNSLSPSA FTSFPDGELV
160 170 180 190 200
TPPIEPMPEP SPQGPEPLLD SEPVTPPVKP VLEPTPQGPE PLLDSEPVTP
210 220 230 240 250
PVKPVLEPTP QGSEPLLDSE PVTLPVEPVP ESSHQGPEPL LDSEPVTLPV
260 270 280 290 300
EPVPESSHQG PEPLLDPKEE SFRDPAEVLG AGAEVDYLEQ FGTSSFKESA
310 320 330 340 350
WRKQSLYLKF DPLLKESPLR SMPVPVAPVT NSTQDTEESG SGNPTEAKLV
360 370 380 390 400
DLDFLGGLDV PVSAPPLCVL EPRGLLPAEP IVDVLKYSQK DLDAVVMQQE
410 420 430 440 450
NLELRNKYED LNTKYLEMGR SLMDLRRSCI SMEEAEKQKE LAEDKIQKIL
460 470 480 490 500
RERDQLTADL NSMEKSFSDL FKRFEKQKEV IEGYQKNEDS LKKCVEDYIV
510 520 530 540 550
KIGKEGQRYQ ALKAHAEEKL KMANEEIAQV RSKAQAEALA LQASLRKAQL
560 570 580
QIQSLEKTVE QKTKENDELN RICDELIAKM EKKI
Length:584
Mass (Da):64,875
Last modified:April 3, 2013 - v2
Checksum:iD249E205B632F412
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06080196 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000032972; ENSRNOP00000034933; ENSRNOG00000017259.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR06080196 Genomic DNA. No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000032972; ENSRNOP00000034933; ENSRNOG00000017259.

Organism-specific databases

RGDi1302948. Tacc3.

Phylogenomic databases

GeneTreeiENSGT00530000063855.
InParanoidiD3Z962.
OMAiHQGLEPV.
OrthoDBiEOG7HB58V.
TreeFamiTF333149.

Miscellaneous databases

NextBioi35565707.

Family and domain databases

InterProiIPR007707. TACC.
[Graphical view]
PANTHERiPTHR13924. PTHR13924. 1 hit.
PfamiPF05010. TACC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
    Rat Genome Sequencing Project Consortium
    Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
    , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
    Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Brown NorwayImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Brown NorwayImported.

Entry informationi

Entry nameiD3Z962_RAT
AccessioniPrimary (citable) accession number: D3Z962
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: February 4, 2015
This is version 29 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.