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D3Z962

- D3Z962_RAT

UniProt

D3Z962 - D3Z962_RAT

Protein
Submitted name:

Protein Tacc3

Gene

Tacc3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 2 (03 Apr 2013)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. astral microtubule organization Source: Ensembl
    2. cerebral cortex development Source: Ensembl
    3. cytoplasmic sequestering of transcription factor Source: Ensembl
    4. hemopoiesis Source: Ensembl
    5. interkinetic nuclear migration Source: Ensembl
    6. neurogenesis Source: Ensembl
    7. regulation of cell cycle Source: Ensembl
    8. regulation of microtubule-based process Source: Ensembl
    9. response to hypoxia Source: Ensembl

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein Tacc3Imported
    Gene namesi
    Name:Tacc3Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 14

    Organism-specific databases

    RGDi1302948. Tacc3.

    Subcellular locationi

    GO - Cellular componenti

    1. centrosome Source: Ensembl
    2. cytoplasm Source: Ensembl

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00530000063855.
    OMAiLEPSHQG.
    OrthoDBiEOG7HB58V.
    TreeFamiTF333149.

    Family and domain databases

    InterProiIPR007707. TACC.
    [Graphical view]
    PANTHERiPTHR13924. PTHR13924. 1 hit.
    PfamiPF05010. TACC. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3Z962-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSLHILTDEN VPNEKSSESR DFLFSAPELT GRSSVLRLSQ KENVPPKNQA    50
    KAAKVTFQTP LRDPQTHRIL SPNMTSKLEA PFALDDSVGL QNDHCVFLQK 100
    ENQLPVAPVD DVPVVQMAAE ILKAEDELQE GILNSLSPSA FTSFPDGELV 150
    TPPIEPMPEP SPQGPEPLLD SEPVTPPVKP VLEPTPQGPE PLLDSEPVTP 200
    PVKPVLEPTP QGSEPLLDSE PVTLPVEPVP ESSHQGPEPL LDSEPVTLPV 250
    EPVPESSHQG PEPLLDPKEE SFRDPAEVLG AGAEVDYLEQ FGTSSFKESA 300
    WRKQSLYLKF DPLLKESPLR SMPVPVAPVT NSTQDTEESG SGNPTEAKLV 350
    DLDFLGGLDV PVSAPPLCVL EPRGLLPAEP IVDVLKYSQK DLDAVVMQQE 400
    NLELRNKYED LNTKYLEMGR SLMDLRRSCI SMEEAEKQKE LAEDKIQKIL 450
    RERDQLTADL NSMEKSFSDL FKRFEKQKEV IEGYQKNEDS LKKCVEDYIV 500
    KIGKEGQRYQ ALKAHAEEKL KMANEEIAQV RSKAQAEALA LQASLRKAQL 550
    QIQSLEKTVE QKTKENDELN RICDELIAKM EKKI 584
    Length:584
    Mass (Da):64,875
    Last modified:April 3, 2013 - v2
    Checksum:iD249E205B632F412
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06080196 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSRNOT00000032972; ENSRNOP00000034933; ENSRNOG00000017259.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AABR06080196 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000032972 ; ENSRNOP00000034933 ; ENSRNOG00000017259 .

    Organism-specific databases

    RGDi 1302948. Tacc3.

    Phylogenomic databases

    GeneTreei ENSGT00530000063855.
    OMAi LEPSHQG.
    OrthoDBi EOG7HB58V.
    TreeFami TF333149.

    Miscellaneous databases

    NextBioi 35565707.

    Family and domain databases

    InterProi IPR007707. TACC.
    [Graphical view ]
    PANTHERi PTHR13924. PTHR13924. 1 hit.
    Pfami PF05010. TACC. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the Brown Norway rat yields insights into mammalian evolution."
      Rat Genome Sequencing Project Consortium
      Gibbs R.A., Weinstock G.M., Metzker M.L., Muzny D.M., Sodergren E.J., Scherer S., Scott G., Steffen D., Worley K.C., Burch P.E., Okwuonu G., Hines S., Lewis L., Deramo C., Delgado O., Dugan-Rocha S., Miner G., Morgan M.
      , Hawes A., Gill R., Holt R.A., Adams M.D., Amanatides P.G., Baden-Tillson H., Barnstead M., Chin S., Evans C.A., Ferriera S., Fosler C., Glodek A., Gu Z., Jennings D., Kraft C.L., Nguyen T., Pfannkoch C.M., Sitter C., Sutton G.G., Venter J.C., Woodage T., Smith D., Lee H.-M., Gustafson E., Cahill P., Kana A., Doucette-Stamm L., Weinstock K., Fechtel K., Weiss R.B., Dunn D.M., Green E.D., Blakesley R.W., Bouffard G.G., De Jong P.J., Osoegawa K., Zhu B., Marra M., Schein J., Bosdet I., Fjell C., Jones S., Krzywinski M., Mathewson C., Siddiqui A., Wye N., McPherson J., Zhao S., Fraser C.M., Shetty J., Shatsman S., Geer K., Chen Y., Abramzon S., Nierman W.C., Havlak P.H., Chen R., Durbin K.J., Egan A., Ren Y., Song X.-Z., Li B., Liu Y., Qin X., Cawley S., Cooney A.J., D'Souza L.M., Martin K., Wu J.Q., Gonzalez-Garay M.L., Jackson A.R., Kalafus K.J., McLeod M.P., Milosavljevic A., Virk D., Volkov A., Wheeler D.A., Zhang Z., Bailey J.A., Eichler E.E., Tuzun E., Birney E., Mongin E., Ureta-Vidal A., Woodwark C., Zdobnov E., Bork P., Suyama M., Torrents D., Alexandersson M., Trask B.J., Young J.M., Huang H., Wang H., Xing H., Daniels S., Gietzen D., Schmidt J., Stevens K., Vitt U., Wingrove J., Camara F., Mar Alba M., Abril J.F., Guigo R., Smit A., Dubchak I., Rubin E.M., Couronne O., Poliakov A., Huebner N., Ganten D., Goesele C., Hummel O., Kreitler T., Lee Y.-A., Monti J., Schulz H., Zimdahl H., Himmelbauer H., Lehrach H., Jacob H.J., Bromberg S., Gullings-Handley J., Jensen-Seaman M.I., Kwitek A.E., Lazar J., Pasko D., Tonellato P.J., Twigger S., Ponting C.P., Duarte J.M., Rice S., Goodstadt L., Beatson S.A., Emes R.D., Winter E.E., Webber C., Brandt P., Nyakatura G., Adetobi M., Chiaromonte F., Elnitski L., Eswara P., Hardison R.C., Hou M., Kolbe D., Makova K., Miller W., Nekrutenko A., Riemer C., Schwartz S., Taylor J., Yang S., Zhang Y., Lindpaintner K., Andrews T.D., Caccamo M., Clamp M., Clarke L., Curwen V., Durbin R.M., Eyras E., Searle S.M., Cooper G.M., Batzoglou S., Brudno M., Sidow A., Stone E.A., Payseur B.A., Bourque G., Lopez-Otin C., Puente X.S., Chakrabarti K., Chatterji S., Dewey C., Pachter L., Bray N., Yap V.B., Caspi A., Tesler G., Pevzner P.A., Haussler D., Roskin K.M., Baertsch R., Clawson H., Furey T.S., Hinrichs A.S., Karolchik D., Kent W.J., Rosenbloom K.R., Trumbower H., Weirauch M., Cooper D.N., Stenson P.D., Ma B., Brent M., Arumugam M., Shteynberg D., Copley R.R., Taylor M.S., Riethman H., Mudunuri U., Peterson J., Guyer M., Felsenfeld A., Old S., Mockrin S., Collins F.S.
      Nature 428:493-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Brown NorwayImported.
    2. Ensembl
      Submitted (JUL-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: Brown NorwayImported.

    Entry informationi

    Entry nameiD3Z962_RAT
    AccessioniPrimary (citable) accession number: D3Z962
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 3, 2013
    Last modified: October 1, 2014
    This is version 26 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3