Skip Header

Contribute Send feedback
Read comments (?) or add your own

D3Z7W7 (D3Z7W7_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
40S ribosomal protein S3a HAMAP-Rule MF_03122
Gene names
Name:Rps3a3 MGI 3643406
Synonyms:Gm9000 MGI 3643406, RPS3A HAMAP-Rule MF_03122
OrganismMus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000096784
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length264 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Function

May play a role during erythropoiesis through regulation of transcription factor DDIT3 By similarity. HAMAP-Rule MF_03122

Subunit structure

Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (28S, 5.8S and 5S). Identified in a mRNP granule complex, at least composed of ACTB, ACTN4, DHX9, ERG, HNRNPA1, HNRNPA2B1, HNRNPAB, HNRNPD, HNRNPL, HNRNPR, HNRNPU, HSPA1, HSPA8, IGF2BP1, ILF2, ILF3, NCBP1, NCL, PABPC1, PABPC4, PABPN1, RPLP0, RPS3, RPS3A, RPS4X, RPS8, RPS9, SYNCRIP, TROVE2, YBX1 and untranslated mRNAs. Binds with high affinity to IPO4. Interacts with DDIT3 By similarity. HAMAP-Rule MF_03122

Subcellular location

Cytoplasm. Nucleus. Note: Localized in cytoplasmic mRNP granules containing untranslated mRNAs By similarity. HAMAP-Rule MF_03122

Sequence similarities

Belongs to the ribosomal protein S3Ae family. HAMAP-Rule MF_03122 RuleBase RU000668

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000096784

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed By similarity HAMAP-Rule MF_03122

Sequences

Sequence LengthMass (Da)Tools
D3Z7W7 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 280AA17BEEE84CBF

FASTA26429,859
        10         20         30         40         50         60 
MAVGKNKRLT KGGKKGAKKK VVDPFSKKDW YDVKAPAMFN IRNIGKTLVT RTQGTKIASD 

        70         80         90        100        110        120 
GLKGRVFEVS LADLQNDEVA FRKFKLTTED VQGKNCLTNF HGMDLTRDKM CSMVKKWQTM 

       130        140        150        160        170        180 
IEAHVDVKTT DGYLLRLFCV GFSKKRNNQI RKTSYAQHQQ VRQIRKKMME IMTREVQTND 

       190        200        210        220        230        240 
LKEVVNKLIP DSIGKDIEKA CQSIYPLHDV FVRKVKMLKK PKFELGKLME LHGEGGSSGK 

       250        260 
AAGDETGAKV ERADGYEPPV QESV

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AC156571 Genomic DNA. No translation available.
IPIIPI00679159.

3D structure databases

ProteinModelPortalD3Z7W7.
SMRD3Z7W7. Positions 21-235.
ModBaseSearch...

Proteomic databases

PRIDED3Z7W7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000074680; ENSMUSP00000096784; ENSMUSG00000059751.

Organism-specific databases

MGIMGI:3643406. Rps3a3.

Phylogenomic databases

GeneTreeENSGT00390000018433.
HOGENOMHOG000105220.
OMADFSKQYI.
OrthoDBEOG4HX51Q.

Gene expression databases

BgeeD3Z7W7.

Family and domain databases

HAMAPMF_03122. Ribosomal_S3Ae_euk.
InterProIPR027500. Ribosomal_S1/3_euk.
IPR001593. Ribosomal_S3Ae.
IPR018281. Ribosomal_S3Ae_CS.
[Graphical view]
PfamPF01015. Ribosomal_S3Ae. 1 hit.
[Graphical view]
PROSITEPS01191. RIBOSOMAL_S3AE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio34022243.
SOURCESearch...

Entry information

Entry nameD3Z7W7_MOUSE
AccessionPrimary (citable) accession number: D3Z7W7
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 29, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info