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Protein
Submitted name:

Ski-like protein

Gene

Skil

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Ski-like proteinImported
Gene namesi
Name:SkilImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 3

Organism-specific databases

MGIiMGI:106203 Skil

PTM / Processingi

Proteomic databases

MaxQBiD3Z7C5
PRIDEiD3Z7C5

Expressioni

Gene expression databases

BgeeiENSMUSG00000027660
ExpressionAtlasiD3Z7C5 baseline and differential

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliD3Z7C5
SMRiD3Z7C5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini178 – 273c-SKI_SMAD_bindInterPro annotationAdd BLAST96

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili403 – 423Sequence analysisAdd BLAST21
Coiled coili426 – 478Sequence analysisAdd BLAST53
Coiled coili491 – 539Sequence analysisAdd BLAST49

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00530000063040
HOGENOMiHOG000039989

Family and domain databases

Gene3Di3.10.260.20, 1 hit
3.10.390.10, 1 hit
InterProiView protein in InterPro
IPR014890 c-SKI_SMAD4-bd_dom
IPR009061 DNA-bd_dom_put_sf
IPR010919 SAND-like_dom_sf
IPR028373 Ski-rel_Sno
IPR003380 SKI/SNO/DAC
IPR037000 Ski_DNA-bd_sf
IPR023216 Tscrpt_reg_SKI_SnoN
PANTHERiPTHR10005 PTHR10005, 2 hits
PTHR10005:SF3 PTHR10005:SF3, 2 hits
PfamiView protein in Pfam
PF08782 c-SKI_SMAD_bind, 1 hit
PF02437 Ski_Sno, 1 hit
SMARTiView protein in SMART
SM01046 c-SKI_SMAD_bind, 1 hit
SUPFAMiSSF46955 SSF46955, 1 hit
SSF63763 SSF63763, 1 hit

Sequencei

Sequence statusi: Complete.

D3Z7C5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENLQSKFSL VQGSNKKLNG MEDDGSPPVK KMMTDIHANG KTLTKVLPGP
60 70 80 90 100
LLIPSDSSTE LTQTLLEGES ISCFQVGGEK RLCLPQVLNS VLREFSLQQI
110 120 130 140 150
NTVCDELYIY CSRCTSDQLH ILKVLGILPF NAPSCGLITL TDAQRLCNAL
160 170 180 190 200
LRPRTFPQNG SILPAKSSLA QLKETGSAFE VEHECLGKCQ GLFAPQFYVQ
210 220 230 240 250
PDAPCIQCLE CCGMFAPQTF VMHSHRSPDK RTCHWGFESA KWHCYLHVNQ
260 270 280 290 300
KYLGTPEEKK LKIILEEMKE KFSMRNGKRI QSKTDTPSGM ELPSWYPVIK
310 320 330 340 350
QEGDHVPQTH SFLHPSYYLY MCDKVVAPNV SLTSAASQSK EATKAETNSS
360 370 380 390 400
ISNNSTSRKK SESAVCSLVR GTSKRDSEDS SPLLVRDGED DKGKIMEDVM
410 420 430 440 450
RTYVRQQEKL NSILQRKQQL QMEVEMLSSS KAMKELTEEQ QNLQKELESL
460 470 480 490 500
QSEHAQRMEE FYIEQRDLEK KLEQVMQQKC TCDSTLEKDR EAEYAAQLAE
510 520 530 540
LRQRLDHAEA DRQELQDELR QEREARQKLE MMIKELKLQI GKSSKPSKD
Length:549
Mass (Da):62,363
Last modified:April 20, 2010 - v1
Checksum:i98B9EA5828D5C172
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC117590 Genomic DNA No translation available.
RefSeqiNP_001258701.1, NM_001271772.1
UniGeneiMm.15406
Mm.491655

Genome annotation databases

EnsembliENSMUST00000117728; ENSMUSP00000113054; ENSMUSG00000027660
GeneIDi20482
UCSCiuc012coi.2 mouse

Similar proteinsi

Entry informationi

Entry nameiD3Z7C5_MOUSE
AccessioniPrimary (citable) accession number: D3Z7C5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 23, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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Main funding by: National Institutes of Health