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Protein
Submitted name:

Ski-like protein

Gene

Skil

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ski-like proteinImported
Gene namesi
Name:SkilImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 3

Organism-specific databases

MGIiMGI:106203. Skil.

PTM / Processingi

Proteomic databases

MaxQBiD3Z7C5.

Expressioni

Gene expression databases

BgeeiENSMUSG00000027660.
ExpressionAtlasiD3Z7C5. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliD3Z7C5.
SMRiD3Z7C5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini178 – 273c-SKI_SMAD_bindInterPro annotationAdd BLAST96

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili426 – 478Sequence analysisAdd BLAST53
Coiled coili491 – 539Sequence analysisAdd BLAST49

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00530000063040.
HOGENOMiHOG000039989.

Family and domain databases

Gene3Di3.10.260.20. 1 hit.
3.10.390.10. 1 hit.
InterProiIPR014890. c-SKI_SMAD4-bd_dom.
IPR009061. DNA-bd_dom_put.
IPR010919. SAND_dom-like.
IPR028373. Ski-rel_Sno.
IPR003380. Transform_Ski.
IPR023216. Tscrpt_reg_SKI_SnoN.
[Graphical view]
PANTHERiPTHR10005. PTHR10005. 1 hit.
PTHR10005:SF3. PTHR10005:SF3. 1 hit.
PfamiPF08782. c-SKI_SMAD_bind. 1 hit.
PF02437. Ski_Sno. 1 hit.
[Graphical view]
SMARTiSM01046. c-SKI_SMAD_bind. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
SSF63763. SSF63763. 1 hit.

Sequencei

Sequence statusi: Complete.

D3Z7C5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENLQSKFSL VQGSNKKLNG MEDDGSPPVK KMMTDIHANG KTLTKVLPGP
60 70 80 90 100
LLIPSDSSTE LTQTLLEGES ISCFQVGGEK RLCLPQVLNS VLREFSLQQI
110 120 130 140 150
NTVCDELYIY CSRCTSDQLH ILKVLGILPF NAPSCGLITL TDAQRLCNAL
160 170 180 190 200
LRPRTFPQNG SILPAKSSLA QLKETGSAFE VEHECLGKCQ GLFAPQFYVQ
210 220 230 240 250
PDAPCIQCLE CCGMFAPQTF VMHSHRSPDK RTCHWGFESA KWHCYLHVNQ
260 270 280 290 300
KYLGTPEEKK LKIILEEMKE KFSMRNGKRI QSKTDTPSGM ELPSWYPVIK
310 320 330 340 350
QEGDHVPQTH SFLHPSYYLY MCDKVVAPNV SLTSAASQSK EATKAETNSS
360 370 380 390 400
ISNNSTSRKK SESAVCSLVR GTSKRDSEDS SPLLVRDGED DKGKIMEDVM
410 420 430 440 450
RTYVRQQEKL NSILQRKQQL QMEVEMLSSS KAMKELTEEQ QNLQKELESL
460 470 480 490 500
QSEHAQRMEE FYIEQRDLEK KLEQVMQQKC TCDSTLEKDR EAEYAAQLAE
510 520 530 540
LRQRLDHAEA DRQELQDELR QEREARQKLE MMIKELKLQI GKSSKPSKD
Length:549
Mass (Da):62,363
Last modified:April 20, 2010 - v1
Checksum:i98B9EA5828D5C172
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC117590 Genomic DNA. No translation available.
RefSeqiNP_001258701.1. NM_001271772.1.
UniGeneiMm.15406.
Mm.491655.

Genome annotation databases

EnsembliENSMUST00000117728; ENSMUSP00000113054; ENSMUSG00000027660.
GeneIDi20482.
UCSCiuc012coi.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC117590 Genomic DNA. No translation available.
RefSeqiNP_001258701.1. NM_001271772.1.
UniGeneiMm.15406.
Mm.491655.

3D structure databases

ProteinModelPortaliD3Z7C5.
SMRiD3Z7C5.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiD3Z7C5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000117728; ENSMUSP00000113054; ENSMUSG00000027660.
GeneIDi20482.
UCSCiuc012coi.2. mouse.

Organism-specific databases

CTDi6498.
MGIiMGI:106203. Skil.

Phylogenomic databases

GeneTreeiENSGT00530000063040.
HOGENOMiHOG000039989.

Miscellaneous databases

ChiTaRSiSkil. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000027660.
ExpressionAtlasiD3Z7C5. baseline and differential.

Family and domain databases

Gene3Di3.10.260.20. 1 hit.
3.10.390.10. 1 hit.
InterProiIPR014890. c-SKI_SMAD4-bd_dom.
IPR009061. DNA-bd_dom_put.
IPR010919. SAND_dom-like.
IPR028373. Ski-rel_Sno.
IPR003380. Transform_Ski.
IPR023216. Tscrpt_reg_SKI_SnoN.
[Graphical view]
PANTHERiPTHR10005. PTHR10005. 1 hit.
PTHR10005:SF3. PTHR10005:SF3. 1 hit.
PfamiPF08782. c-SKI_SMAD_bind. 1 hit.
PF02437. Ski_Sno. 1 hit.
[Graphical view]
SMARTiSM01046. c-SKI_SMAD_bind. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
SSF63763. SSF63763. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD3Z7C5_MOUSE
AccessioniPrimary (citable) accession number: D3Z7C5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 2, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.