D3Z6Q6 (D3Z6Q6_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein Prickle4 Ensembl ENSMUSP00000108925 Ensembl ENSMUSP00000119045

Gene names

Name:

Prickle4 Ensembl ENSMUSP00000108925 Ensembl ENSMUSP00000119045 MGI 2685785

Organism

Mus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000108925

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	369 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities	Contains 1 PET domain. SAAS SAAS010442 Contains 2 LIM zinc-binding domains. RuleBase RU000350
Caution	The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000108925 Ensembl ENSMUSP00000119045

Ontologies

Keywords
Domain	LIM domain RuleBase RU000350 SAAS SAAS010442 Repeat SAAS SAAS010442
Ligand	Metal-binding Zinc
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3Z6Q6 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: 6682FE6006C1855B	FASTA	369	40,694
	10 20 30 40 50 60 MSVQNSDWSL QQDNPIFREP DPPVYTDSDS GRRPVEDYED TSAQAATCSS LGPPCLDINQ 70 80 90 100 110 120 VSNWPGFRTL LQQLPPQDSD ERYCLALGEE ELAQLRLFCA QRKQKSLGQG VARLLPPKLE 130 140 150 160 170 180 GYTCKKCKKL LDPGEYGVFA ARAGEQSCWH RPCFACQACG QGLINLIYFY HEGHLYCGRH 190 200 210 220 230 240 HAELLRPRCP ACDQLIFSQR CTEAEGQRWH ENHFCCQDCA GPLDGGRYAL PGGSPCCPSC 250 260 270 280 290 300 FSKRYRSAGS SSVGVAEGQA SFEEEGPDPS VGWNRASSDD KITSRAALLS AVPTLTLETL 310 320 330 340 350 360 NGASKRQDRD GPQTPGSPIE DSPCPTCSSS SESEPEGFFF GQRLPEPWKT PENLQADDRD ISRKHCTIC

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Lineage-specific biology revealed by a finished genome assembly of the mouse." Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P. PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C57BL/6J Ensembl ENSMUSP00000108925 Ensembl ENSMUSP00000119045.
[2]	Ensembl Submitted (MAY-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: C57BL/6J Ensembl ENSMUSP00000108925.
[3]	Ensembl Submitted (FEB-2012) to UniProtKB Cited for: IDENTIFICATION. Strain: C57BL/6J Ensembl ENSMUSP00000119045.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC139214 Genomic DNA. No translation available.
IPI	IPI00378254.
3D structure databases
SMR	D3Z6Q6. Positions 186-245.
ModBase	Search...
Proteomic databases
PRIDE	D3Z6Q6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSMUST00000113300; ENSMUSP00000108925; ENSMUSG00000096549. ENSMUST00000143789; ENSMUSP00000119045; ENSMUSG00000079444.
Organism-specific databases
MGI	MGI:2685785. Prickle4.
Phylogenomic databases
GeneTree	ENSGT00550000074438.
HOGENOM	HOG000293417.
OMA	CFESRYS.
Gene expression databases
ArrayExpress	D3Z6Q6.
Family and domain databases
Gene3D	2.10.110.10. 2 hits.
InterPro	IPR010442. PET_domain. IPR001781. Znf_LIM. [Graphical view]
Pfam	PF00412. LIM. 2 hits. PF06297. PET. 1 hit. [Graphical view]
SMART	SM00132. LIM. 2 hits. [Graphical view]
PROSITE	PS00478. LIM_DOMAIN_1. 2 hits. PS50023. LIM_DOMAIN_2. 2 hits. PS51303. PET. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	35551511.
SOURCE	Search...

Entry information

Entry name

D3Z6Q6_MOUSE

Accession

Primary (citable) accession number: D3Z6Q6

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)