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D3Z5H2

- D3Z5H2_MOUSE

UniProt

D3Z5H2 - D3Z5H2_MOUSE

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Protein
Submitted name:

DNA repair protein XRCC2

Gene
Xrcc2, mCG_1077
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 3 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA-dependent ATPase activity Source: InterPro

GO - Biological processi

  1. cellular response to DNA damage stimulus Source: MGI
  2. double-strand break repair via homologous recombination Source: MGI
  3. in utero embryonic development Source: MGI
  4. negative regulation of neuron apoptotic process Source: MGI
  5. positive regulation of neurogenesis Source: MGI
  6. response to gamma radiation Source: MGI
  7. response to X-ray Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
DNA repair protein XRCC2Imported
Submitted name:
X-ray repair complementing defective repair in Chinese hamster cells 2, isoform CRA_aImported
Gene namesi
Name:Xrcc2Imported
ORF Names:mCG_1077Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 5

Organism-specific databases

MGIiMGI:1927345. Xrcc2.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000020445.
HOGENOMiHOG000004802.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR013632. DNA_recomb/repair_Rad51_C.
IPR027417. P-loop_NTPase.
IPR020588. RecA_ATP-bd.
[Graphical view]
PfamiPF08423. Rad51. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS50162. RECA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3Z5H2-1 [UniParc]FASTAAdd to Basket

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MLYHLTARCI LPKSEGGLQI EVLFIDTDYH FDMLRLVTVL EHRLSQSSEE    50
AMKLCLARLF LAYCSSSMQL LLTLHSLEAL LCSRPSLCLL IVDSLSSFYW 100
IDRVSGGESV ALQESTLQKC SQLLERLVTE YRLLLFATTQ SLMQKGSDSA 150
DGPSSSKHPC DGDMGYRAYL CKAWQRVVKH RVIFSRDDEA KSSRFSLVSR 200
HLKSNSLKKH SFMVRESGVE FC 222
Length:222
Mass (Da):25,199
Last modified:April 20, 2010 - v1
Checksum:iF2564A34CBD9EC85
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC159977 Genomic DNA. No translation available.
CH466586 Genomic DNA. Translation: EDL03073.1.
UniGeneiMm.143767.

Genome annotation databases

EnsembliENSMUST00000114922; ENSMUSP00000110572; ENSMUSG00000028933.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC159977 Genomic DNA. No translation available.
CH466586 Genomic DNA. Translation: EDL03073.1 .
UniGenei Mm.143767.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000114922 ; ENSMUSP00000110572 ; ENSMUSG00000028933 .

Organism-specific databases

MGIi MGI:1927345. Xrcc2.

Phylogenomic databases

GeneTreei ENSGT00390000020445.
HOGENOMi HOG000004802.

Miscellaneous databases

NextBioi 35551243.
SOURCEi Search...

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
InterProi IPR013632. DNA_recomb/repair_Rad51_C.
IPR027417. P-loop_NTPase.
IPR020588. RecA_ATP-bd.
[Graphical view ]
Pfami PF08423. Rad51. 1 hit.
[Graphical view ]
SUPFAMi SSF52540. SSF52540. 1 hit.
PROSITEi PS50162. RECA_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
    Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
    , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
    Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  2. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  4. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD3Z5H2_MOUSE
AccessioniPrimary (citable) accession number: D3Z5H2
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: April 16, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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