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Protein
Submitted name:

Homeobox protein Hox-A1

Gene

Hoxa1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 5 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. abducens nerve formation Source: MGI
  2. anatomical structure formation involved in morphogenesis Source: MGI
  3. anatomical structure morphogenesis Source: MGI
  4. anterior/posterior pattern specification Source: MGI
  5. artery development Source: MGI
  6. artery morphogenesis Source: MGI
  7. cellular response to retinoic acid Source: MGI
  8. central nervous system neuron differentiation Source: MGI
  9. cochlea development Source: MGI
  10. cochlea morphogenesis Source: MGI
  11. cognition Source: MGI
  12. embryonic neurocranium morphogenesis Source: MGI
  13. facial nerve structural organization Source: MGI
  14. facial nucleus development Source: MGI
  15. hindbrain development Source: MGI
  16. inner ear development Source: MGI
  17. inner ear morphogenesis Source: MGI
  18. motor neuron axon guidance Source: MGI
  19. nervous system development Source: MGI
  20. neuromuscular process Source: MGI
  21. optokinetic behavior Source: MGI
  22. outer ear morphogenesis Source: MGI
  23. positive regulation of transcription from RNA polymerase II promoter Source: MGI
  24. regulation of behavior Source: MGI
  25. regulation of transcription from RNA polymerase II promoter Source: MGI
  26. rhombomere 3 development Source: MGI
  27. rhombomere 4 development Source: MGI
  28. rhombomere 5 development Source: MGI
  29. semicircular canal formation Source: MGI
  30. sensory perception of sound Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Homeobox protein Hox-A1Imported
Gene namesi
Name:Hoxa1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:96170. Hoxa1.

Expressioni

Gene expression databases

BgeeiD3Z4E1.
ExpressionAtlasiD3Z4E1. baseline and differential.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000118940.
HOGENOMiHOG000171545.
KOiK09301.

Sequencei

Sequence statusi: Complete.

D3Z4E1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDNARMNSFL EYPILGSGDS GTCSARAYPS DHGITTFQSC AVSANSCGGD
60 70 80 90 100
DRFLVGRGVQ ISSPHHHHHH HHHHHPQTAT YQTSGNLGIS YSHSSCGPSY
110 120 130
GAQNFSAPYG PYGLNQEADP PRSLSFPCFR DVFSSADL
Length:138
Mass (Da):14,878
Last modified:April 20, 2010 - v1
Checksum:i57ACCC28290BC76B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091106 Genomic DNA. No translation available.
RefSeqiXP_006505671.1. XM_006505608.1.
UniGeneiMm.197.

Genome annotation databases

EnsembliENSMUST00000120363; ENSMUSP00000113724; ENSMUSG00000029844.
GeneIDi15394.
KEGGimmu:15394.
UCSCiuc009bxx.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091106 Genomic DNA. No translation available.
RefSeqiXP_006505671.1. XM_006505608.1.
UniGeneiMm.197.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000120363; ENSMUSP00000113724; ENSMUSG00000029844.
GeneIDi15394.
KEGGimmu:15394.
UCSCiuc009bxx.1. mouse.

Organism-specific databases

CTDi3198.
MGIiMGI:96170. Hoxa1.

Phylogenomic databases

GeneTreeiENSGT00760000118940.
HOGENOMiHOG000171545.
KOiK09301.

Miscellaneous databases

NextBioi35550991.
SOURCEiSearch...

Gene expression databases

BgeeiD3Z4E1.
ExpressionAtlasiD3Z4E1. baseline and differential.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (APR-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD3Z4E1_MOUSE
AccessioniPrimary (citable) accession number: D3Z4E1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: April 1, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.