D3Z4E1 (D3Z4E1_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Homeobox protein Hox-A1 Ensembl ENSMUSP00000113724

Gene names

Name:

Hoxa1 Ensembl ENSMUSP00000113724 MGI 96170

Organism

Mus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000113724

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	138 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000113724

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	anatomical structure formation involved in morphogenesis Inferred from genetic interaction PubMed 10529420. Source: MGI anterior/posterior pattern specification Inferred from mutant phenotype PubMed 15367676. Source: MGI central nervous system neuron differentiation Inferred from mutant phenotype PubMed 9806922. Source: MGI facial nerve structural organization Inferred from genetic interaction PubMed 9806922. Source: MGI facial nucleus development Inferred from mutant phenotype PubMed 8102800. Source: MGI inner ear morphogenesis Inferred from mutant phenotype PubMed 15367676. Source: MGI motor neuron axon guidance Inferred from genetic interaction PubMed 9806922. Source: MGI positive regulation of transcription from RNA polymerase II promoter Inferred from direct assay PubMed 18787068. Source: MGI rhombomere 3 development Inferred from mutant phenotype PubMed 9806922. Source: MGI rhombomere 4 development Inferred from mutant phenotype PubMed 8102800PubMed 9806922. Source: MGI rhombomere 5 development Inferred from mutant phenotype PubMed 8102800PubMed 9806922. Source: MGI
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3Z4E1 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: 57ACCC28290BC76B	FASTA	138	14,878
	10 20 30 40 50 60 MDNARMNSFL EYPILGSGDS GTCSARAYPS DHGITTFQSC AVSANSCGGD DRFLVGRGVQ 70 80 90 100 110 120 ISSPHHHHHH HHHHHPQTAT YQTSGNLGIS YSHSSCGPSY GAQNFSAPYG PYGLNQEADP 130 PRSLSFPCFR DVFSSADL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Lineage-specific biology revealed by a finished genome assembly of the mouse." Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P. PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C57BL/6J Ensembl ENSMUSP00000113724.
[2]	Ensembl Submitted (MAY-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: C57BL/6J Ensembl ENSMUSP00000113724.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC091106 Genomic DNA. No translation available.
IPI	IPI00406332.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSMUST00000120363; ENSMUSP00000113724; ENSMUSG00000029844.
UCSC	uc009bxx.1. mouse.
Organism-specific databases
MGI	MGI:96170. Hoxa1.
Phylogenomic databases
GeneTree	ENSGT00700000104161.
HOGENOM	HOG000171545.
Gene expression databases
ArrayExpress	D3Z4E1.
Bgee	D3Z4E1.
Family and domain databases
ProtoNet	Search...
Other
NextBio	35550991.
SOURCE	Search...

Entry information

Entry name

D3Z4E1_MOUSE

Accession

Primary (citable) accession number: D3Z4E1

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)