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D3Z4E1

- D3Z4E1_MOUSE

UniProt

D3Z4E1 - D3Z4E1_MOUSE

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Protein
Submitted name:

Homeobox protein Hox-A1

Gene

Hoxa1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 5 out of 5- Protein predictedi

Functioni

GO - Biological processi

  1. anatomical structure formation involved in morphogenesis Source: MGI
  2. anatomical structure morphogenesis Source: MGI
  3. anterior/posterior pattern specification Source: MGI
  4. cellular response to retinoic acid Source: MGI
  5. central nervous system neuron differentiation Source: MGI
  6. facial nerve structural organization Source: MGI
  7. facial nucleus development Source: MGI
  8. hindbrain development Source: MGI
  9. inner ear morphogenesis Source: MGI
  10. motor neuron axon guidance Source: MGI
  11. nervous system development Source: MGI
  12. positive regulation of transcription from RNA polymerase II promoter Source: MGI
  13. regulation of transcription from RNA polymerase II promoter Source: MGI
  14. rhombomere 3 development Source: MGI
  15. rhombomere 4 development Source: MGI
  16. rhombomere 5 development Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Homeobox protein Hox-A1Imported
Gene namesi
Name:Hoxa1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 6

Organism-specific databases

MGIiMGI:96170. Hoxa1.

Expressioni

Gene expression databases

BgeeiD3Z4E1.
ExpressionAtlasiD3Z4E1. baseline and differential.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000118940.
HOGENOMiHOG000171545.
KOiK09301.

Sequencei

Sequence statusi: Complete.

D3Z4E1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDNARMNSFL EYPILGSGDS GTCSARAYPS DHGITTFQSC AVSANSCGGD
60 70 80 90 100
DRFLVGRGVQ ISSPHHHHHH HHHHHPQTAT YQTSGNLGIS YSHSSCGPSY
110 120 130
GAQNFSAPYG PYGLNQEADP PRSLSFPCFR DVFSSADL
Length:138
Mass (Da):14,878
Last modified:April 20, 2010 - v1
Checksum:i57ACCC28290BC76B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091106 Genomic DNA. No translation available.
RefSeqiXP_006505671.1. XM_006505608.1.
UniGeneiMm.197.

Genome annotation databases

EnsembliENSMUST00000120363; ENSMUSP00000113724; ENSMUSG00000029844.
GeneIDi15394.
KEGGimmu:15394.
UCSCiuc009bxx.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091106 Genomic DNA. No translation available.
RefSeqi XP_006505671.1. XM_006505608.1.
UniGenei Mm.197.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000120363 ; ENSMUSP00000113724 ; ENSMUSG00000029844 .
GeneIDi 15394.
KEGGi mmu:15394.
UCSCi uc009bxx.1. mouse.

Organism-specific databases

CTDi 3198.
MGIi MGI:96170. Hoxa1.

Phylogenomic databases

GeneTreei ENSGT00760000118940.
HOGENOMi HOG000171545.
KOi K09301.

Miscellaneous databases

NextBioi 35550991.
SOURCEi Search...

Gene expression databases

Bgeei D3Z4E1.
ExpressionAtlasi D3Z4E1. baseline and differential.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD3Z4E1_MOUSE
AccessioniPrimary (citable) accession number: D3Z4E1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: January 7, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.