D3Z157 (D3Z157_MOUSE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Intraflagellar transport protein 80 homolog Ensembl ENSMUSP00000122919

Gene names

Name:

Ift80 Ensembl ENSMUSP00000122919 MGI 1915509

Organism

Mus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000122919

Taxonomic identifier

10090 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length	159 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000122919

Ontologies

Keywords
Domain	Repeat RuleBase RU003532 WD repeat RuleBase RU000362
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	bone morphogenesis Inferred from mutant phenotype PubMed 21227999. Source: MGI cilium morphogenesis Inferred from mutant phenotype PubMed 22771375. Source: MGI osteoblast differentiation Inferred from mutant phenotype PubMed 22771375. Source: MGI smoothened signaling pathway Inferred from mutant phenotype PubMed 21227999. Source: MGI
Cellular_component	centrosome Inferred from direct assay PubMed 19253336. Source: MGI cilium Inferred from direct assay PubMed 19253336. Source: MGI
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	159	1	Ensembl ENSMUSP00000122919

Sequences

	Sequence		Length	Mass (Da)
	D3Z157 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: 31316504589BBA51	FASTA	159	17,661
	10 20 30 40 50 60 MRLKISLSKE PKHQELVSCV GWTTAEELYS CSDDHQIVKW NLLTSETSLI VKLPDDIYPI 70 80 90 100 110 120 DLHWFPKSLG IKKQTQAESF VLTSSDGKFH LISKLGRVEK SVEAHCGAVL AGRWNYEGTA 130 140 150 LVTVGEDGQV KIWSKTGMLR STLAQQGTPV YSVAWGPDS

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Lineage-specific biology revealed by a finished genome assembly of the mouse." Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P. PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: C57BL/6J Ensembl ENSMUSP00000122919.
[2]	Ensembl Submitted (MAY-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: C57BL/6J Ensembl ENSMUSP00000122919.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC115062 Genomic DNA. No translation available. AC122876 Genomic DNA. No translation available.
IPI	IPI00858289.
3D structure databases
ProteinModelPortal	D3Z157.
SMR	D3Z157. Positions 10-159.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSMUST00000148031; ENSMUSP00000122919; ENSMUSG00000027778.
Organism-specific databases
MGI	MGI:1915509. Ift80.
Phylogenomic databases
GeneTree	ENSGT00440000033499.
Gene expression databases
ArrayExpress	D3Z157.
Bgee	D3Z157.
Family and domain databases
Gene3D	2.130.10.10. 1 hit.
InterPro	IPR015943. WD40/YVTN_repeat-like_dom. IPR001680. WD40_repeat. IPR017986. WD40_repeat_dom. [Graphical view]
Pfam	PF00400. WD40. 1 hit. [Graphical view]
SMART	SM00320. WD40. 2 hits. [Graphical view]
SUPFAM	SSF50978. WD40_like. 1 hit.
PROSITE	PS50082. WD_REPEATS_2. 1 hit. PS50294. WD_REPEATS_REGION. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	35550208.
SOURCE	Search...

Entry information

Entry name

D3Z157_MOUSE

Accession

Primary (citable) accession number: D3Z157

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	April 3, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)