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D3Z157

- D3Z157_MOUSE

UniProt

D3Z157 - D3Z157_MOUSE

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Protein
Submitted name:

Intraflagellar transport protein 80 homolog

Gene
Ift80
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 4 out of 5 - Protein predictedi

Functioni

GO - Biological processi

  1. bone morphogenesis Source: MGI
  2. chondrocyte differentiation Source: MGI
  3. cilium assembly Source: MGI
  4. cilium morphogenesis Source: MGI
  5. intraciliary transport Source: MGI
  6. negative regulation of epithelial cell proliferation Source: MGI
  7. negative regulation of non-canonical Wnt signaling pathway Source: MGI
  8. osteoblast differentiation Source: MGI
  9. positive regulation of smoothened signaling pathway Source: MGI
  10. smoothened signaling pathway Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Intraflagellar transport protein 80 homologImported
Gene namesi
Name:Ift80Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 3

Organism-specific databases

MGIiMGI:1915509. Ift80.

Subcellular locationi

GO - Cellular componenti

  1. centrosome Source: MGI
  2. ciliary basal body Source: MGI
  3. cilium Source: MGI
  4. intraciliary transport particle B Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

ArrayExpressiD3Z157.
BgeeiD3Z157.

Structurei

3D structure databases

ProteinModelPortaliD3Z157.

Family & Domainsi

Keywords - Domaini

RepeatUniRule annotation, WD repeatUniRule annotation

Phylogenomic databases

GeneTreeiENSGT00440000033499.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 1 hit.
[Graphical view]
SMARTiSM00320. WD40. 2 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS50082. WD_REPEATS_2. 1 hit.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

D3Z157-1 [UniParc]FASTAAdd to Basket

« Hide

MRLKISLSKE PKHQELVSCV GWTTAEELYS CSDDHQIVKW NLLTSETSLI    50
VKLPDDIYPI DLHWFPKSLG IKKQTQAESF VLTSSDGKFH LISKLGRVEK 100
SVEAHCGAVL AGRWNYEGTA LVTVGEDGQV KIWSKTGMLR STLAQQGTPV 150
YSVAWGPD 158
Length:158
Mass (Da):17,574
Last modified:May 14, 2014 - v2
Checksum:i416504589BBA5176
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei158 – 1581Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC115062 Genomic DNA. No translation available.
AC122876 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000148031; ENSMUSP00000122919; ENSMUSG00000027778.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC115062 Genomic DNA. No translation available.
AC122876 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali D3Z157.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000148031 ; ENSMUSP00000122919 ; ENSMUSG00000027778 .

Organism-specific databases

MGIi MGI:1915509. Ift80.

Phylogenomic databases

GeneTreei ENSGT00440000033499.

Miscellaneous databases

NextBioi 35550208.
SOURCEi Search...

Gene expression databases

ArrayExpressi D3Z157.
Bgeei D3Z157.

Family and domain databases

Gene3Di 2.130.10.10. 1 hit.
InterProi IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view ]
Pfami PF00400. WD40. 1 hit.
[Graphical view ]
SMARTi SM00320. WD40. 2 hits.
[Graphical view ]
SUPFAMi SSF50978. SSF50978. 1 hit.
PROSITEi PS50082. WD_REPEATS_2. 1 hit.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD3Z157_MOUSE
AccessioniPrimary (citable) accession number: D3Z157
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: May 14, 2014
Last modified: July 9, 2014
This is version 30 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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