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Protein
Submitted name:

TSC22 domain family protein 1

Gene

Tsc22d1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
TSC22 domain family protein 1Imported
Gene namesi
Name:Tsc22d1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 14

Organism-specific databases

MGIiMGI:109127. Tsc22d1.

PTM / Processingi

Proteomic databases

MaxQBiD3Z0V7.
PaxDbiD3Z0V7.
PeptideAtlasiD3Z0V7.

Expressioni

Gene expression databases

BgeeiD3Z0V7.
ExpressionAtlasiD3Z0V7. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000044517.

Structurei

3D structure databases

ProteinModelPortaliD3Z0V7.
SMRiD3Z0V7. Positions 910-965.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili918 – 95235Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG4797. Eukaryota.
ENOG411251N. LUCA.
GeneTreeiENSGT00530000063062.
HOGENOMiHOG000090196.
OrthoDBiEOG7RZ5PT.
PhylomeDBiD3Z0V7.

Family and domain databases

InterProiIPR000580. TSC-22_Dip_Bun.
[Graphical view]
PANTHERiPTHR12348. PTHR12348. 2 hits.
PfamiPF01166. TSC22. 1 hit.
[Graphical view]
ProDomiPD007152. TSC-22_Dip_Bun. 1 hit.
[Graphical view] [Entries sharing at least one domain]
PROSITEiPS01289. TSC22. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3Z0V7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHQPPESTAA AAAAADISAR KMAHPAMFPR RGSGGGSASA LNAAGTGVSG
60 70 80 90 100
AAPSSEDFPP PSLLQPPPPA ASSTQGPQPP PPQSLNLLSQ AQLQGQPLAP
110 120 130 140 150
GGTQMKKKSG FQITSVTPAQ ISASISSNNS IAEDTESYDD LDESHTEDLS
160 170 180 190 200
SSEILDVSLS RATDLGEPER SSSEETLNNF QEAETPGAVS PNQPHLPQPH
210 220 230 240 250
LPHLPQQNVV INGNAHPHHL HHHHHPHHGH HLHHGHHHSS HAAVAGPSIP
260 270 280 290 300
GGPPSSPVSR KLSTTGSSDG GVPVAPPPAV PSSGLPASVM TNIRTPSTTG
310 320 330 340 350
SLAAGITVGV VSSQQQQQQQ QQPTVNTSRF RVVKLDSTSE PFKKGRWTCT
360 370 380 390 400
EFYEKENAVP ATEGVAVNKV VETVKQTPTE ASSSERESTS GSSVSSSVST
410 420 430 440 450
LSHYTESVGS GEMMGAPAVV APQQPPLPPA PPGLQGVALQ QLEFSSPAPQ
460 470 480 490 500
SIAAVSMPQS ISQSQMSQVQ LQPQELSFQQ KQTLQPVPLQ ATMSAATGIQ
510 520 530 540 550
PSPVSVVGIT AAVGQQPSVS SLAQPQLPYS QTAPPVQTPL PGAPPQQLQY
560 570 580 590 600
GQQQPMVPAQ IAPGHGQPVT QNPTSEYVQQ QQQPIFQAAL SSGQSSSTGT
610 620 630 640 650
GAGISVIPVA QAQGIQLPGQ PTAVQTQPAG AAGQPIGQAQ TAVSTVPTGG
660 670 680 690 700
QIASIGQQAN IPTAVQQPST QVTPSVIQQG APPSSQVVLP APTGIIHQGV
710 720 730 740 750
QTRASSLPQQ LVIAPQSTLV TVPPQPQGVE TVAQGVVSQQ LPTGSPLPSA
760 770 780 790 800
STISVTNQVS SAAPSGMPSV PTNLVPPQNI AQPPATQNGS LVQSVSQSPL
810 820 830 840 850
IATNINLPLA QQIPLSSTQF STQSLAQAIG SQMEDARRPA EPSLGGLPQT
860 870 880 890 900
MSGDSGGMSA VSDGSSSSLA APASLFPLKV LPLTTPLVDG EDESSGASVV
910 920 930 940 950
AIDNKIEQAM DLVKSHLMYA VREEVEVLKE QIKELIEKNS QLEQENNLLK
960 970 980 990
TLASPEQLAQ FQAQLQTGSP PATTQPQGTT QPPAQPASQG SGSTA
Length:995
Mass (Da):102,086
Last modified:April 20, 2010 - v1
Checksum:i0F0D851AB9B3D158
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134842 Genomic DNA. No translation available.
AC142266 Genomic DNA. No translation available.
RefSeqiNP_001297575.1. NM_001310646.1.
XP_006518866.1. XM_006518803.2.
UniGeneiMm.153272.

Genome annotation databases

EnsembliENSMUST00000110888; ENSMUSP00000106513; ENSMUSG00000022010.
GeneIDi21807.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134842 Genomic DNA. No translation available.
AC142266 Genomic DNA. No translation available.
RefSeqiNP_001297575.1. NM_001310646.1.
XP_006518866.1. XM_006518803.2.
UniGeneiMm.153272.

3D structure databases

ProteinModelPortaliD3Z0V7.
SMRiD3Z0V7. Positions 910-965.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000044517.

Proteomic databases

MaxQBiD3Z0V7.
PaxDbiD3Z0V7.
PeptideAtlasiD3Z0V7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000110888; ENSMUSP00000106513; ENSMUSG00000022010.
GeneIDi21807.

Organism-specific databases

CTDi8848.
MGIiMGI:109127. Tsc22d1.

Phylogenomic databases

eggNOGiKOG4797. Eukaryota.
ENOG411251N. LUCA.
GeneTreeiENSGT00530000063062.
HOGENOMiHOG000090196.
OrthoDBiEOG7RZ5PT.
PhylomeDBiD3Z0V7.

Miscellaneous databases

ChiTaRSiTsc22d1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiD3Z0V7.
ExpressionAtlasiD3Z0V7. baseline and differential.

Family and domain databases

InterProiIPR000580. TSC-22_Dip_Bun.
[Graphical view]
PANTHERiPTHR12348. PTHR12348. 2 hits.
PfamiPF01166. TSC22. 1 hit.
[Graphical view]
ProDomiPD007152. TSC-22_Dip_Bun. 1 hit.
[Graphical view] [Entries sharing at least one domain]
PROSITEiPS01289. TSC22. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD3Z0V7_MOUSE
AccessioniPrimary (citable) accession number: D3Z0V7
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: July 6, 2016
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.