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D3Z079 (D3Z079_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1116 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000123253

Sequences

Sequence LengthMass (Da)Tools
D3Z079 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: AB8E0C8C41693427

FASTA1,116123,602
        10         20         30         40         50         60 
MRKFNIRKVL DGLTAGSSSA SQQQQQQQHP PGNREPEIQE TLQSEHFQLC KTVRHGFPYQ 

        70         80         90        100        110        120 
PSALAFDPVQ KILAVGTQTG ALRLFGRPGV ECYCQHDSGA AVIQLQFLIN EGALVSALAD 

       130        140        150        160        170        180 
DTLHLWNLRQ KRPAVLHSLK FCRERVTFCH LPFQSKWLYV GTERGNIHIV NVESFTLSGY 

       190        200        210        220        230        240 
VIMWNKAIEL SSKAHPGPVV HISDNPMDEG KLLIGFESGT VVLWDLKSKK ADYRYTYDEA 

       250        260        270        280        290        300 
IHSVAWHHEG KQFICSHSDG TLTIWNVRSP AKPVQTITPH GKQLKDGKKP EPCKPILKVE 

       310        320        330        340        350        360 
LKTTRSGEPF IILSGGLSYD TVGRRPCLTV MHGKSTAVLE MDYSIVDFLT LCETPYPNDF 

       370        380        390        400        410        420 
QEPYAVVVLL EKDLVLIDLA QNGYPIFENP YPLSIHESPV TCCEYFADCP VDLIPALYSV 

       430        440        450        460        470        480 
GARQKRQGYS KKEWPINGGN WGLGAQSYPE IIITGHADGS VKFWDASAIT LQVLYKLKTS 

       490        500        510        520        530        540 
KVFEKSRNKD DRQNTDIVDE DPYAIQIISW CPESRMLCIA GVSAHVIIYR FSKQEVLTEV 

       550        560        570        580        590        600 
IPMLEVRLLY EINDVDTPEG EQPPPLSTPV GSSNPQPIPP QSHPSTSSSS SDGLRDNVPC 

       610        620        630        640        650        660 
LKVKNSPLKQ SPGYQTELVI QLVWVGGEPP QQITSLALNS SYGLVVFGNC NGIAMVDYLQ 

       670        680        690        700        710        720 
KAVLLNLSTI ELYGSNDPYR REPRSPRKSR QPSGAGLCDI TEGTVVPEDR CKSPTSAKMS 

       730        740        750        760        770        780 
RKLSLPTDLK PDLDVKDNSF SRSRSSSVTS IDKESRETIS ALHFCETLTR KADSSPSPCL 

       790        800        810        820        830        840 
WVGTTVGTAF VITLNLPPGP EQRLLQPVIV SPSGTILRLK GAILRMAFLD ATGCLMSPAY 

       850        860        870        880        890        900 
EPWKEHNVAE EKDEKEKLKK RRPVSVSPSS SQEISENQYA VICSEKQAKV MSLPTQSCAY 

       910        920        930        940        950        960 
KQNITETSFV LRGDIVALSN SVCLACFCAN GHIMTFSLPS LRPLLDVYYL PLTNMRIART 

       970        980        990       1000       1010       1020 
FCFANNGQAL YLVSPTEIQR LTYSQETCEN LQEMLGELFT PVETPEAPNR GFFKGLFGGG 

      1030       1040       1050       1060       1070       1080 
AQSLDREELF GESSSGKASR SLAQHIPGPG GIEGVKGAAS GVVGELARAR LALDERGQKL 

      1090       1100       1110 
SDLEERTAAM MSSADSFSKH AHEMMLKYKD KKWYQF 

« Hide

References

« Hide 'large scale' references
[1]"Comprehensive identification of phosphorylation sites in postsynaptic density preparations."
Trinidad J.C., Specht C.G., Thalhammer A., Schoepfer R., Burlingame A.L.
Mol. Cell. Proteomics 5:914-922(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[2]"Large-scale phosphorylation analysis of mouse liver."
Villen J., Beausoleil S.A., Gerber S.A., Gygi S.P.
Proc. Natl. Acad. Sci. U.S.A. 104:1488-1493(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[3]"The phagosomal proteome in interferon-gamma-activated macrophages."
Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P.
Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[4]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000123253.
[5]Ensembl
Submitted (MAY-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000123253.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC122390 Genomic DNA. No translation available.
RefSeqNP_001074813.2. NM_001081344.2.
UniGeneMm.331751.

3D structure databases

ProteinModelPortalD3Z079.
SMRD3Z079. Positions 442-469, 632-658, 1052-1108.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDED3Z079.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000141722; ENSMUSP00000123253; ENSMUSG00000019790.
GeneID78808.
KEGGmmu:78808.
UCSCuc007eiz.2. mouse.

Organism-specific databases

CTD134957.
MGIMGI:1926058. Stxbp5.

Phylogenomic databases

GeneTreeENSGT00390000000018.
HOGENOMHOG000110929.
KOK08518.
TreeFamTF314585.

Gene expression databases

ArrayExpressD3Z079.
BgeeD3Z079.

Family and domain databases

Gene3D2.130.10.10. 3 hits.
InterProIPR000664. Lethal2_giant.
IPR013905. Lgl_C_dom.
IPR013577. LLGL2.
IPR001388. Synaptobrevin.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamPF08596. Lgl_C. 1 hit.
PF08366. LLGL. 1 hit.
PF00400. WD40. 2 hits.
[Graphical view]
PRINTSPR00962. LETHAL2GIANT.
SMARTSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMSSF50978. SSF50978. 5 hits.
PROSITEPS50892. V_SNARE. 1 hit.
PS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 1 hit.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio349566.
SOURCESearch...

Entry information

Entry nameD3Z079_MOUSE
AccessionPrimary (citable) accession number: D3Z079
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 11, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)