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D3Z079

- D3Z079_MOUSE

UniProt

D3Z079 - D3Z079_MOUSE

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Protein
Submitted name: Syntaxin-binding protein 5
Gene
Stxbp5
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein binding Source: MGI
  2. syntaxin binding Source: MGI
  3. syntaxin-1 binding Source: MGI
Complete GO annotation...

GO - Biological processi

  1. exocytosis Source: MGI
  2. regulation of exocytosis Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Syntaxin-binding protein 5Imported
Gene namesi
Name:Stxbp5Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 10

Organism-specific databases

MGIiMGI:1926058. Stxbp5.

Subcellular locationi

GO - Cellular componenti

  1. acetylcholine-gated channel complex Source: MGI
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiD3Z079.

Expressioni

Gene expression databases

ArrayExpressiD3Z079.
BgeeiD3Z079.

Structurei

3D structure databases

ProteinModelPortaliD3Z079.
SMRiD3Z079. Positions 442-469, 632-658, 1052-1108.

Family & Domainsi

Keywords - Domaini

RepeatUniRule annotation, WD repeatUniRule annotation

Phylogenomic databases

GeneTreeiENSGT00390000000018.
HOGENOMiHOG000110929.
KOiK08518.
TreeFamiTF314585.

Family and domain databases

Gene3Di2.130.10.10. 3 hits.
InterProiIPR000664. Lethal2_giant.
IPR013905. Lgl_C_dom.
IPR013577. LLGL2.
IPR001388. Synaptobrevin.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF08596. Lgl_C. 1 hit.
PF08366. LLGL. 1 hit.
PF00400. WD40. 2 hits.
[Graphical view]
PRINTSiPR00962. LETHAL2GIANT.
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 5 hits.
PROSITEiPS50892. V_SNARE. 1 hit.
PS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 1 hit.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3Z079-1 [UniParc]FASTAAdd to Basket

« Hide

MRKFNIRKVL DGLTAGSSSA SQQQQQQQHP PGNREPEIQE TLQSEHFQLC     50
KTVRHGFPYQ PSALAFDPVQ KILAVGTQTG ALRLFGRPGV ECYCQHDSGA 100
AVIQLQFLIN EGALVSALAD DTLHLWNLRQ KRPAVLHSLK FCRERVTFCH 150
LPFQSKWLYV GTERGNIHIV NVESFTLSGY VIMWNKAIEL SSKAHPGPVV 200
HISDNPMDEG KLLIGFESGT VVLWDLKSKK ADYRYTYDEA IHSVAWHHEG 250
KQFICSHSDG TLTIWNVRSP AKPVQTITPH GKQLKDGKKP EPCKPILKVE 300
LKTTRSGEPF IILSGGLSYD TVGRRPCLTV MHGKSTAVLE MDYSIVDFLT 350
LCETPYPNDF QEPYAVVVLL EKDLVLIDLA QNGYPIFENP YPLSIHESPV 400
TCCEYFADCP VDLIPALYSV GARQKRQGYS KKEWPINGGN WGLGAQSYPE 450
IIITGHADGS VKFWDASAIT LQVLYKLKTS KVFEKSRNKD DRQNTDIVDE 500
DPYAIQIISW CPESRMLCIA GVSAHVIIYR FSKQEVLTEV IPMLEVRLLY 550
EINDVDTPEG EQPPPLSTPV GSSNPQPIPP QSHPSTSSSS SDGLRDNVPC 600
LKVKNSPLKQ SPGYQTELVI QLVWVGGEPP QQITSLALNS SYGLVVFGNC 650
NGIAMVDYLQ KAVLLNLSTI ELYGSNDPYR REPRSPRKSR QPSGAGLCDI 700
TEGTVVPEDR CKSPTSAKMS RKLSLPTDLK PDLDVKDNSF SRSRSSSVTS 750
IDKESRETIS ALHFCETLTR KADSSPSPCL WVGTTVGTAF VITLNLPPGP 800
EQRLLQPVIV SPSGTILRLK GAILRMAFLD ATGCLMSPAY EPWKEHNVAE 850
EKDEKEKLKK RRPVSVSPSS SQEISENQYA VICSEKQAKV MSLPTQSCAY 900
KQNITETSFV LRGDIVALSN SVCLACFCAN GHIMTFSLPS LRPLLDVYYL 950
PLTNMRIART FCFANNGQAL YLVSPTEIQR LTYSQETCEN LQEMLGELFT 1000
PVETPEAPNR GFFKGLFGGG AQSLDREELF GESSSGKASR SLAQHIPGPG 1050
GIEGVKGAAS GVVGELARAR LALDERGQKL SDLEERTAAM MSSADSFSKH 1100
AHEMMLKYKD KKWYQF 1116
Length:1,116
Mass (Da):123,602
Last modified:April 20, 2010 - v1
Checksum:iAB8E0C8C41693427
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC122390 Genomic DNA. No translation available.
RefSeqiNP_001074813.2. NM_001081344.2.
UniGeneiMm.331751.

Genome annotation databases

EnsembliENSMUST00000141722; ENSMUSP00000123253; ENSMUSG00000019790.
GeneIDi78808.
KEGGimmu:78808.
UCSCiuc007eiz.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC122390 Genomic DNA. No translation available.
RefSeqi NP_001074813.2. NM_001081344.2.
UniGenei Mm.331751.

3D structure databases

ProteinModelPortali D3Z079.
SMRi D3Z079. Positions 442-469, 632-658, 1052-1108.
ModBasei Search...

Proteomic databases

PRIDEi D3Z079.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000141722 ; ENSMUSP00000123253 ; ENSMUSG00000019790 .
GeneIDi 78808.
KEGGi mmu:78808.
UCSCi uc007eiz.2. mouse.

Organism-specific databases

CTDi 134957.
MGIi MGI:1926058. Stxbp5.

Phylogenomic databases

GeneTreei ENSGT00390000000018.
HOGENOMi HOG000110929.
KOi K08518.
TreeFami TF314585.

Miscellaneous databases

NextBioi 349566.
SOURCEi Search...

Gene expression databases

ArrayExpressi D3Z079.
Bgeei D3Z079.

Family and domain databases

Gene3Di 2.130.10.10. 3 hits.
InterProi IPR000664. Lethal2_giant.
IPR013905. Lgl_C_dom.
IPR013577. LLGL2.
IPR001388. Synaptobrevin.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view ]
Pfami PF08596. Lgl_C. 1 hit.
PF08366. LLGL. 1 hit.
PF00400. WD40. 2 hits.
[Graphical view ]
PRINTSi PR00962. LETHAL2GIANT.
SMARTi SM00320. WD40. 7 hits.
[Graphical view ]
SUPFAMi SSF50978. SSF50978. 5 hits.
PROSITEi PS50892. V_SNARE. 1 hit.
PS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 1 hit.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Comprehensive identification of phosphorylation sites in postsynaptic density preparations."
    Trinidad J.C., Specht C.G., Thalhammer A., Schoepfer R., Burlingame A.L.
    Mol. Cell. Proteomics 5:914-922(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  2. Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  3. "The phagosomal proteome in interferon-gamma-activated macrophages."
    Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P.
    Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  5. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD3Z079_MOUSE
AccessioniPrimary (citable) accession number: D3Z079
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 11, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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