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D3YZW7

- D3YZW7_MOUSE

UniProt

D3YZW7 - D3YZW7_MOUSE

Protein
Submitted name:

Autophagy-related protein 16-1

Gene

Atg16l1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
  1. Functioni

    GO - Molecular functioni

    1. protein binding Source: MGI

    GO - Biological processi

    1. autophagic vacuole assembly Source: MGI
    2. negative stranded viral RNA replication Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Autophagy-related protein 16-1Imported
    Gene namesi
    Name:Atg16l1Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 1

    Organism-specific databases

    MGIiMGI:1924290. Atg16l1.

    Subcellular locationi

    GO - Cellular componenti

    1. autophagic vacuole Source: MGI
    2. autophagic vacuole membrane Source: MGI

    Expressioni

    Gene expression databases

    ArrayExpressiD3YZW7.
    BgeeiD3YZW7.

    Structurei

    3D structure databases

    ProteinModelPortaliD3YZW7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00740000115355.

    Family and domain databases

    InterProiIPR013923. Autophagy-rel_prot_16.
    [Graphical view]
    PfamiPF08614. ATG16. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    D3YZW7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPNRHEISPG HDGAWNDSQL QEMAQLRIKH QEELTELHKK RGELAQLVID    50
    LNNQMQQKDK EIQMNEAKIS EYLQTISDLE TNCLDLRTKL QDLEVANQTL 100
    KDEYDALQIT FTALEEKLRK TTEENQELVT RWMAEKAQEA NRLNAENEKD 150
    SRRR 154
    Length:154
    Mass (Da):18,144
    Last modified:April 20, 2010 - v1
    Checksum:i749123C5E01857F7
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei154 – 1541Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC102630 Genomic DNA. No translation available.
    AC159967 Genomic DNA. No translation available.

    Genome annotation databases

    EnsembliENSMUST00000144047; ENSMUSP00000120955; ENSMUSG00000026289.
    UCSCiuc007bxi.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC102630 Genomic DNA. No translation available.
    AC159967 Genomic DNA. No translation available.

    3D structure databases

    ProteinModelPortali D3YZW7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000144047 ; ENSMUSP00000120955 ; ENSMUSG00000026289 .
    UCSCi uc007bxi.2. mouse.

    Organism-specific databases

    MGIi MGI:1924290. Atg16l1.

    Phylogenomic databases

    GeneTreei ENSGT00740000115355.

    Miscellaneous databases

    NextBioi 35549901.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi D3YZW7.
    Bgeei D3YZW7.

    Family and domain databases

    InterProi IPR013923. Autophagy-rel_prot_16.
    [Graphical view ]
    Pfami PF08614. ATG16. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    2. Ensembl
      Submitted (MAY-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiD3YZW7_MOUSE
    AccessioniPrimary (citable) accession number: D3YZW7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 36 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3