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D3YZW7

- D3YZW7_MOUSE

UniProt

D3YZW7 - D3YZW7_MOUSE

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Protein
Submitted name:

Autophagy-related protein 16-1

Gene
Atg16l1
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. protein binding Source: MGI

GO - Biological processi

  1. autophagic vacuole assembly Source: MGI
  2. negative stranded viral RNA replication Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Autophagy-related protein 16-1Imported
Gene namesi
Name:Atg16l1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 1

Organism-specific databases

MGIiMGI:1924290. Atg16l1.

Subcellular locationi

GO - Cellular componenti

  1. autophagic vacuole Source: MGI
  2. autophagic vacuole membrane Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

ArrayExpressiD3YZW7.
BgeeiD3YZW7.

Structurei

3D structure databases

ProteinModelPortaliD3YZW7.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00740000115355.

Family and domain databases

InterProiIPR013923. Autophagy-rel_prot_16.
[Graphical view]
PfamiPF08614. ATG16. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

D3YZW7-1 [UniParc]FASTAAdd to Basket

« Hide

MPNRHEISPG HDGAWNDSQL QEMAQLRIKH QEELTELHKK RGELAQLVID    50
LNNQMQQKDK EIQMNEAKIS EYLQTISDLE TNCLDLRTKL QDLEVANQTL 100
KDEYDALQIT FTALEEKLRK TTEENQELVT RWMAEKAQEA NRLNAENEKD 150
SRRR 154
Length:154
Mass (Da):18,144
Last modified:April 20, 2010 - v1
Checksum:i749123C5E01857F7
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei154 – 1541Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC102630 Genomic DNA. No translation available.
AC159967 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000144047; ENSMUSP00000120955; ENSMUSG00000026289.
UCSCiuc007bxi.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC102630 Genomic DNA. No translation available.
AC159967 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali D3YZW7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000144047 ; ENSMUSP00000120955 ; ENSMUSG00000026289 .
UCSCi uc007bxi.2. mouse.

Organism-specific databases

MGIi MGI:1924290. Atg16l1.

Phylogenomic databases

GeneTreei ENSGT00740000115355.

Miscellaneous databases

NextBioi 35549901.
SOURCEi Search...

Gene expression databases

ArrayExpressi D3YZW7.
Bgeei D3YZW7.

Family and domain databases

InterProi IPR013923. Autophagy-rel_prot_16.
[Graphical view ]
Pfami PF08614. ATG16. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD3YZW7_MOUSE
AccessioniPrimary (citable) accession number: D3YZW7
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: July 9, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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