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D3YZW7

- D3YZW7_MOUSE

UniProt

D3YZW7 - D3YZW7_MOUSE

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Protein
Submitted name:

Autophagy-related protein 16-1

Gene

Atg16l1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

GO - Biological processi

  1. autophagic vacuole assembly Source: MGI
  2. negative stranded viral RNA replication Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Autophagy-related protein 16-1Imported
Gene namesi
Name:Atg16l1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 1

Organism-specific databases

MGIiMGI:1924290. Atg16l1.

Subcellular locationi

GO - Cellular componenti

  1. autophagic vacuole Source: MGI
  2. autophagic vacuole membrane Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

BgeeiD3YZW7.
ExpressionAtlasiD3YZW7. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliD3YZW7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000118869.

Family and domain databases

InterProiIPR013923. Autophagy-rel_prot_16.
[Graphical view]
PfamiPF08614. ATG16. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

D3YZW7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPNRHEISPG HDGAWNDSQL QEMAQLRIKH QEELTELHKK RGELAQLVID
60 70 80 90 100
LNNQMQQKDK EIQMNEAKIS EYLQTISDLE TNCLDLRTKL QDLEVANQTL
110 120 130 140 150
KDEYDALQIT FTALEEKLRK TTEENQELVT RWMAEKAQEA NRLNAENEKD

SRRR
Length:154
Mass (Da):18,144
Last modified:April 20, 2010 - v1
Checksum:i749123C5E01857F7
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei154 – 1541Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC102630 Genomic DNA. No translation available.
AC159967 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000144047; ENSMUSP00000120955; ENSMUSG00000026289.
UCSCiuc007bxi.2. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC102630 Genomic DNA. No translation available.
AC159967 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali D3YZW7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000144047 ; ENSMUSP00000120955 ; ENSMUSG00000026289 .
UCSCi uc007bxi.2. mouse.

Organism-specific databases

MGIi MGI:1924290. Atg16l1.

Phylogenomic databases

GeneTreei ENSGT00760000118869.

Miscellaneous databases

NextBioi 35549901.
SOURCEi Search...

Gene expression databases

Bgeei D3YZW7.
ExpressionAtlasi D3YZW7. baseline and differential.

Family and domain databases

InterProi IPR013923. Autophagy-rel_prot_16.
[Graphical view ]
Pfami PF08614. ATG16. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD3YZW7_MOUSE
AccessioniPrimary (citable) accession number: D3YZW7
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 29, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3