Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

D3YZK4 (D3YZK4_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Taf1 Ensembl ENSMUSP00000098895 MGI 1336878
OrganismMus musculus (Mouse) [Reference proteome] Ensembl ENSMUSP00000098895
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length1902 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000098895

Sequences

Sequence LengthMass (Da)Tools
D3YZK4 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 082A891374BEABDE

FASTA1,902215,852
        10         20         30         40         50         60 
MGPGWAGLLQ DKGGGSPSVV MSDTDSDEES AGGGPFSLTG FLFGNINGAG QLEGESVLDD 

        70         80         90        100        110        120 
ECKKHLAGLG ALGLGSLITE LTANEELSGS DGALVNDEGW IRSREDAVDY SDINEVAEDE 

       130        140        150        160        170        180 
SRRYQQTMGS LQPLCHTDYD EDDYDADCED IDCKLMPPPP PPPGPLKKEK DQDDITGEKV 

       190        200        210        220        230        240 
DFSSSSDSES EMGPQDAAQS ESKDGQLTLP LAGIMQHDAT KLLPSVTELF PEFRPGKVLR 

       250        260        270        280        290        300 
FLRLFGPGKN VPSVWRSARR KRKKKHRELI QEGQVQEEEC SVELEVNQKS LWNYDYAPPP 

       310        320        330        340        350        360 
LPDQCLSDDE ITMMAPVESK FSQSTGDTDK VMDTKPRVAE WRYGPARLWY DMLGVPEDGS 

       370        380        390        400        410        420 
GFDYGFKMKK TEHESTIKCN IMKKLRKLEE NSGVDLLADE NFLMVTQLHW EDDIIWDGED 

       430        440        450        460        470        480 
VKHKGTKPQR ASLAGWLPSS MTRNAMAYNV QQGRPCIKKP TSQTKQNTHT QNSISQPSGS 

       490        500        510        520        530        540 
LHTTLDDDKP WYSIFPIDNE DLVYGRWEDN IIWDAQNMPR ILEPPVLTLD PNDENLILEI 

       550        560        570        580        590        600 
PDEKEEATSN SPSKENKKES SLKKSRILLG KTGVIKEEPQ QNMSQPEVKD PWNLSNDEYY 

       610        620        630        640        650        660 
YPKQQGLRGT FGGNIIQHSI PAVELRQPFF PTHMGPIKLR QFHRPPLKKY SFGALSQPGP 

       670        680        690        700        710        720 
HSVQPLLKHI KKKAKMREQE RQASGGGEMF FMRTPQDLTG KDGDLILAEY SEENGPLMMQ 

       730        740        750        760        770        780 
VGMATKIKNY YKRKPGKDPG APDCKYGETV YCHTSPFLGS LHPGQLLQAF ENNLFRAPIY 

       790        800        810        820        830        840 
LHKMPESDFL IIRTRQGYFI RELVDIFVVG QQCPLFEVPG PNSKRANTHI RDFLQVFIYR 

       850        860        870        880        890        900 
LFWKSKDRPR RIRMEDIKKA FPSHSESSIR KRLKLCADFK RTGMDSNWWV LKSDFRLPTE 

       910        920        930        940        950        960 
EEIRAMVSPE QCCAYYSMIA AEQRLKDAGY GEKSFFAPEE ENEEDFQMKI DDEVRTAPWN 

       970        980        990       1000       1010       1020 
TTRAFIAAMK GKCLLEVTGV ADPTGCGEGF SYVKIPNKPT QQKDDKEPQP VKKTVTGTDA 

      1030       1040       1050       1060       1070       1080 
DLRRLSLKNA KQLLRKFGVP EEEIKKLSRW EVIDVVRTMS TEQARSGEGP MSKFARGSRF 

      1090       1100       1110       1120       1130       1140 
SVAEHQERYK EECQRIFDLQ NKVLSSTEVL STDTDSSSAE DSDFEEMGKN IENMLQNKKT 

      1150       1160       1170       1180       1190       1200 
SSQLSREREE QERKELQRML LEADGEAAGS AAAGNNHRDD DTASVTSLNS SATGRCLKIY 

      1210       1220       1230       1240       1250       1260 
RTFRDEEGKE YVRCETVRKA TVIDAYVRIR TTKDEEFIRK FALFDEQHRE EMRKERRRIQ 

      1270       1280       1290       1300       1310       1320 
EQLRRLKRNQ EKEKLKGPPE KKPKKMKERP DLKLKCGACG AIGHMRTNKF CPLYYQTNAP 

      1330       1340       1350       1360       1370       1380 
PSNPVAMTEE QEEELEKTVI HNDNEELIKV EGTKIVLGKQ LIESADEVRR KSLVLKFPKQ 

      1390       1400       1410       1420       1430       1440 
QLPPKKKRRV GTTVHCDYLN RPHKSIHRRR TDPMVTLSSI LESIINDMRD LPNTYPFHTP 

      1450       1460       1470       1480       1490       1500 
VNAKVVKDYY KIITRPMDLQ TLRENVRKRL YPSREEFREH LELIVKNSAT YNGPKHSLTQ 

      1510       1520       1530       1540       1550       1560 
ISQSMLDLCD EKLKEKEDKL ARLEKAINPL LDDDDQVAFS FILDNIVTQK MMAVPDSWPF 

      1570       1580       1590       1600       1610       1620 
HHPVNKKFVP DYYKVIVSPM DLETIRKNIS KHKYQSRESF LDDVNLILAN SVKYNGPESQ 

      1630       1640       1650       1660       1670       1680 
YTKTAQEIVN VCHQTLTEYD EHLTQLEKDI CTAKEAALEE AELESLDPMT PGPYTPQPPD 

      1690       1700       1710       1720       1730       1740 
LYDNNTSLSV SRDASVYQDE SNLSVLDIPS ATSEKQLTQE GGDGDGDLAD EEEGTVQQPQ 

      1750       1760       1770       1780       1790       1800 
ASVLYEDLLM SEGEDDEEDA GSDEEGDNPF FAIQLSESGS DSDVESGSLR PKQPRVLQEN 

      1810       1820       1830       1840       1850       1860 
TRMGMENEES MMSYEGDGGD ASRGLEDSNI SYGSYEEPDP KSNTQDTSFS SIGGYEVSEE 

      1870       1880       1890       1900 
EEDEEEQRSG PSVLSQVHLS EDEEDSEDFH SIAGDTDLDS DE 

« Hide

References

« Hide 'large scale' references
[1]"The phagosomal proteome in interferon-gamma-activated macrophages."
Trost M., English L., Lemieux S., Courcelles M., Desjardins M., Thibault P.
Immunity 30:143-154(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
[2]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000098895.
[3]Ensembl
Submitted (MAY-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000098895.
[4]"SIRT5-mediated lysine desuccinylation impacts diverse metabolic pathways."
Park J., Chen Y., Tishkoff D.X., Peng C., Tan M., Dai L., Xie Z., Zhang Y., Zwaans B.M., Skinner M.E., Lombard D.B., Zhao Y.
Mol. Cell 50:919-930(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL806534 Genomic DNA. No translation available.
AL831722 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalD3YZK4.
SMRD3YZK4. Positions 1391-1657.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDED3YZK4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000101341; ENSMUSP00000098895; ENSMUSG00000031314.
KEGGmmu:270627.
UCSCuc009txw.1. mouse.

Organism-specific databases

CTD6872.
MGIMGI:1336878. Taf1.

Phylogenomic databases

GeneTreeENSGT00390000012659.
HOGENOMHOG000020066.
KOK03125.
OMADEFYYPK.
PhylomeDBD3YZK4.
TreeFamTF313573.

Gene expression databases

BgeeD3YZK4.

Family and domain databases

Gene3D1.10.1100.10. 1 hit.
1.20.920.10. 2 hits.
InterProIPR001487. Bromodomain.
IPR018359. Bromodomain_CS.
IPR011177. TAF1_animal.
IPR009067. TAF_II_230-bd.
IPR022591. TFIID_sub1_DUF3591.
[Graphical view]
PfamPF00439. Bromodomain. 2 hits.
PF12157. DUF3591. 1 hit.
PF09247. TBP-binding. 1 hit.
[Graphical view]
PIRSFPIRSF003047. TAF1_animal. 1 hit.
PRINTSPR00503. BROMODOMAIN.
SMARTSM00297. BROMO. 2 hits.
[Graphical view]
SUPFAMSSF47055. SSF47055. 1 hit.
SSF47370. SSF47370. 2 hits.
PROSITEPS00633. BROMODOMAIN_1. 2 hits.
PS50014. BROMODOMAIN_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio393355.
SOURCESearch...

Entry information

Entry nameD3YZK4_MOUSE
AccessionPrimary (citable) accession number: D3YZK4
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: July 9, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)