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Protein
Submitted name:

Serotransferrin

Gene

Trf

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • iron ion transport Source: MGI
  • SMAD protein signal transduction Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
SerotransferrinImported
Gene namesi
Name:TrfImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589 Componenti: Chromosome 9

Organism-specific databases

MGIiMGI:98821. Trf.

Subcellular locationi

GO - Cellular componenti

  • apical plasma membrane Source: MGI
  • basal part of cell Source: MGI
  • basal plasma membrane Source: MGI
  • blood microparticle Source: MGI
  • cell surface Source: MGI
  • coated pit Source: MGI
  • cytoplasmic membrane-bounded vesicle Source: MGI
  • dense body Source: MGI
  • early endosome Source: MGI
  • endocytic vesicle Source: MGI
  • endosome Source: MGI
  • extracellular exosome Source: MGI
  • extracellular space Source: MGI
  • late endosome Source: MGI
  • perinuclear region of cytoplasm Source: MGI
  • recycling endosome Source: MGI
  • vesicle Source: MGI
  • vesicle coat Source: MGI
Complete GO annotation...

PTM / Processingi

Proteomic databases

MaxQBiD3YYR8.
PRIDEiD3YYR8.

Expressioni

Gene expression databases

BgeeiD3YYR8.
ExpressionAtlasiD3YYR8. baseline.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000035158.

Structurei

3D structure databases

ProteinModelPortaliD3YYR8.
SMRiD3YYR8. Positions 19-237.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000001619.
HOGENOMiHOG000213562.
OMAiKKSCHAS.

Family and domain databases

InterProiIPR001156. Transferrin-like_dom.
IPR018195. Transferrin_Fe_BS.
[Graphical view]
PfamiPF00405. Transferrin. 1 hit.
[Graphical view]
PRINTSiPR00422. TRANSFERRIN.
SMARTiSM00094. TR_FER. 1 hit.
[Graphical view]
PROSITEiPS00205. TRANSFERRIN_LIKE_1. 1 hit.
PS00206. TRANSFERRIN_LIKE_2. 1 hit.
PS51408. TRANSFERRIN_LIKE_4. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

D3YYR8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWTFSQGKRR AGLCLAVPDK TVKWCAVSEH ENTKCISFRD HMKTVLPPDG
60 70 80 90 100
PRLACVKKTS YPDCIKAISA SEADAMTLDG GWVYDAGLTP NNLKPVAAEF
110 120 130 140 150
YGSVEHPQTY YYAVAVVKKG TDFQLNQLEG KKSCHTGLGR SAGWVIPIGL
160 170 180 190 200
LFCKLSEPRS PLEKAVSSFF SGSCVPCADP VAFPKLCQLC PGCGCSSTQP
210 220 230
FFGYVGAFKC LKDGGGDVAF VKHTTIFEVL PEKADRD
Length:237
Mass (Da):25,676
Last modified:April 20, 2010 - v1
Checksum:iFF6651AAD5C0A9AA
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei237 – 2371Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC156633 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000126359; ENSMUSP00000120472; ENSMUSG00000032554.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC156633 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliD3YYR8.
SMRiD3YYR8. Positions 19-237.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000035158.

Proteomic databases

MaxQBiD3YYR8.
PRIDEiD3YYR8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000126359; ENSMUSP00000120472; ENSMUSG00000032554.

Organism-specific databases

MGIiMGI:98821. Trf.

Phylogenomic databases

GeneTreeiENSGT00390000001619.
HOGENOMiHOG000213562.
OMAiKKSCHAS.

Miscellaneous databases

NextBioi35549628.
SOURCEiSearch...

Gene expression databases

BgeeiD3YYR8.
ExpressionAtlasiD3YYR8. baseline.

Family and domain databases

InterProiIPR001156. Transferrin-like_dom.
IPR018195. Transferrin_Fe_BS.
[Graphical view]
PfamiPF00405. Transferrin. 1 hit.
[Graphical view]
PRINTSiPR00422. TRANSFERRIN.
SMARTiSM00094. TR_FER. 1 hit.
[Graphical view]
PROSITEiPS00205. TRANSFERRIN_LIKE_1. 1 hit.
PS00206. TRANSFERRIN_LIKE_2. 1 hit.
PS51408. TRANSFERRIN_LIKE_4. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD3YYR8_MOUSE
AccessioniPrimary (citable) accession number: D3YYR8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 24, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.