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Protein

Coronin

Gene

Coro1a

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
CoroninUniRule annotation
Gene namesi
Name:Coro1aImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:1345961 Coro1a

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PeptideAtlasiD3YXM2
PRIDEiD3YXM2

Expressioni

Gene expression databases

BgeeiENSMUSG00000030707
ExpressionAtlasiD3YXM2 baseline and differential

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

SMRiD3YXM2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini77 – 116WD_REPEATS_REGIONInterPro annotationAdd BLAST40
Repeati77 – 116WDPROSITE-ProRule annotationAdd BLAST40

Sequence similaritiesi

Belongs to the WD repeat coronin family.UniRule annotation

Keywords - Domaini

RepeatUniRule annotation, WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0303 Eukaryota
ENOG410XQAD LUCA
GeneTreeiENSGT00760000119195
HOGENOMiHOG000166356

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR029508 CORO1A
IPR015505 Coronin
IPR015048 DUF1899
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PANTHERiPTHR10856 PTHR10856, 1 hit
PTHR10856:SF18 PTHR10856:SF18, 1 hit
PfamiView protein in Pfam
PF08953 DUF1899, 1 hit
PF00400 WD40, 1 hit
SMARTiView protein in SMART
SM01166 DUF1899, 1 hit
SM00320 WD40, 1 hit
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Fragment.

D3YXM2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRQVVRSSK FRHVFGQPAK ADQCYEDVRV SQTTWDSGFC AVNPKFMALI
60 70 80 90 100
CEASGGGAFL VLPLGKTGRV DKNVPLVCGH TAPVLDIAWC PHNDNVIASG
110
SEDCTVMVWE IPDGGL
Length:116
Mass (Da):12,509
Last modified:October 5, 2016 - v8
Checksum:i72A2F2596C469FBE
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei116Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC124505 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000135087; ENSMUSP00000115960; ENSMUSG00000030707

Similar proteinsi

Entry informationi

Entry nameiD3YXM2_MOUSE
AccessioniPrimary (citable) accession number: D3YXM2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: October 5, 2016
Last modified: April 25, 2018
This is version 70 of the entry and version 8 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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