SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D3YWI8

- D3YWI8_MOUSE

UniProt

D3YWI8 - D3YWI8_MOUSE

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Intraflagellar transport protein 80 homolog
Gene
Ift80
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 4 out of 5 - Protein predictedi

Functioni

GO - Biological processi

  1. bone morphogenesis Source: MGI
  2. chondrocyte differentiation Source: MGI
  3. cilium assembly Source: MGI
  4. cilium morphogenesis Source: MGI
  5. intraciliary transport Source: MGI
  6. negative regulation of epithelial cell proliferation Source: MGI
  7. negative regulation of non-canonical Wnt signaling pathway Source: MGI
  8. osteoblast differentiation Source: MGI
  9. positive regulation of smoothened signaling pathway Source: MGI
  10. smoothened signaling pathway Source: MGI
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Intraflagellar transport protein 80 homologImported
Gene namesi
Name:Ift80Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 3

Organism-specific databases

MGIiMGI:1915509. Ift80.

Subcellular locationi

GO - Cellular componenti

  1. centrosome Source: MGI
  2. ciliary basal body Source: MGI
  3. cilium Source: MGI
  4. intraciliary transport particle B Source: MGI
Complete GO annotation...

Expressioni

Gene expression databases

ArrayExpressiD3YWI8.
BgeeiD3YWI8.

Structurei

3D structure databases

ProteinModelPortaliD3YWI8.
SMRiD3YWI8. Positions 9-209.

Family & Domainsi

Keywords - Domaini

RepeatUniRule annotation, WD repeatUniRule annotation

Phylogenomic databases

GeneTreeiENSGT00440000033499.
HOGENOMiHOG000207221.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 1 hit.
[Graphical view]
SMARTiSM00320. WD40. 4 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS50082. WD_REPEATS_2. 1 hit.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

D3YWI8-1 [UniParc]FASTAAdd to Basket

« Hide

MRLKISLSKE PKHQELVSCV GWTTAEELYS CSDDHQIVKW NLLTSETSLI    50
VKLPDDIYPI DLHWFPKSLG IKKQTQAESF VLTSSDGKFH LISKLGRVEK 100
SVEAHCGAVL AGRWNYEGTA LVTVGEDGQV KIWSKTGMLR STLAQQGTPV 150
YSVAWGPDSE KVLYTAGKQL IIKPLQPNAK VLQWKAHDGI ILKVDWNSVN 200
DLILSAGED 209
Length:209
Mass (Da):23,228
Last modified:April 20, 2010 - v1
Checksum:iEB8A07D9D4212918
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei209 – 2091Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC115062 Genomic DNA. No translation available.
AC122876 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000154741; ENSMUSP00000118406; ENSMUSG00000027778.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC115062 Genomic DNA. No translation available.
AC122876 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortali D3YWI8.
SMRi D3YWI8. Positions 9-209.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000154741 ; ENSMUSP00000118406 ; ENSMUSG00000027778 .

Organism-specific databases

MGIi MGI:1915509. Ift80.

Phylogenomic databases

GeneTreei ENSGT00440000033499.
HOGENOMi HOG000207221.

Miscellaneous databases

NextBioi 35549112.
SOURCEi Search...

Gene expression databases

ArrayExpressi D3YWI8.
Bgeei D3YWI8.

Family and domain databases

Gene3Di 2.130.10.10. 1 hit.
InterProi IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view ]
Pfami PF00400. WD40. 1 hit.
[Graphical view ]
SMARTi SM00320. WD40. 4 hits.
[Graphical view ]
SUPFAMi SSF50978. SSF50978. 1 hit.
PROSITEi PS50082. WD_REPEATS_2. 1 hit.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD3YWI8_MOUSE
AccessioniPrimary (citable) accession number: D3YWI8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: July 9, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

Similar proteinsi