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Protein
Submitted name:

Protein spinster homolog 1

Gene

Spns1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein spinster homolog 1Imported
Gene namesi
Name:Spns1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:1920908. Spns1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei57 – 7418HelicalSequence analysisAdd
BLAST
Transmembranei99 – 11921HelicalSequence analysisAdd
BLAST
Transmembranei126 – 14520HelicalSequence analysisAdd
BLAST
Transmembranei165 – 18117HelicalSequence analysisAdd
BLAST
Transmembranei188 – 20619HelicalSequence analysisAdd
BLAST
Transmembranei218 – 23821HelicalSequence analysisAdd
BLAST
Transmembranei273 – 29422HelicalSequence analysisAdd
BLAST
Transmembranei323 – 34422HelicalSequence analysisAdd
BLAST
Transmembranei356 – 37520HelicalSequence analysisAdd
BLAST
Transmembranei381 – 41131HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiD3YWA9.
PeptideAtlasiD3YWA9.
PRIDEiD3YWA9.

Expressioni

Gene expression databases

BgeeiENSMUSG00000030741.
ExpressionAtlasiD3YWA9. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000032994.

Structurei

3D structure databases

ProteinModelPortaliD3YWA9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini61 – 453393MFSInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1330. Eukaryota.
COG0477. LUCA.
GeneTreeiENSGT00390000005976.
HOGENOMiHOG000276167.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3YWA9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGSDTAPFL SQADDPDDGP APGHPGLPGP MGNPKSGELE VPDCEGLQRI
60 70 80 90 100
TGLSRGHSTL IVVVLCYINL LNYMDRFTVA GVLTDIEQFF NIGDGSTGLI
110 120 130 140 150
QTVFISSYMV LAPVFGYLGD RYNRKYLMCG GIAFWSLVTL GSSFIPREHF
160 170 180 190 200
WLLLLTRGLV GVGEASYSTI APTLIADLFV ADQRSRMLSI FYFAIPVGSG
210 220 230 240 250
LGYIAGSKVK DVAGDWHWAL RVTPGLGVLA VLLLFLVVQE PPRGAVERHS
260 270 280 290 300
GSPPLSPTSW WADLKALARN PSFVLSSLGF TSVAFVTGSL ALWAPAFLLR
310 320 330 340 350
SRVVLGETPP CLPGDSCSSS DSLIFGLITC LTGVLGVGLG VEISRRLRRF
360 370 380 390 400
NPRADPLVCA AGLLGSAPFL FLALACARGS IVATYIFIFI GETLLSMNWA
410 420 430 440 450
IVADILLYVV IPTRRSTAEA FQIVLSHLLG DAGSPYLIGL VCCMSLGPQM

TGL
Length:453
Mass (Da):48,281
Last modified:April 20, 2010 - v1
Checksum:i2918BACA2FF38834
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC125322 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000119754; ENSMUSP00000112555; ENSMUSG00000030741.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC125322 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliD3YWA9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000032994.

Proteomic databases

PaxDbiD3YWA9.
PeptideAtlasiD3YWA9.
PRIDEiD3YWA9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000119754; ENSMUSP00000112555; ENSMUSG00000030741.

Organism-specific databases

MGIiMGI:1920908. Spns1.

Phylogenomic databases

eggNOGiKOG1330. Eukaryota.
COG0477. LUCA.
GeneTreeiENSGT00390000005976.
HOGENOMiHOG000276167.

Miscellaneous databases

ChiTaRSiSpns1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000030741.
ExpressionAtlasiD3YWA9. baseline and differential.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD3YWA9_MOUSE
AccessioniPrimary (citable) accession number: D3YWA9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 7, 2016
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.