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D3YUB7 (D3YUB7_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length558 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSMUSP00000075552 Ensembl ENSMUSP00000099083 Ensembl ENSMUSP00000103623 Ensembl ENSMUSP00000134517 Ensembl ENSMUSP00000080837 Ensembl ENSMUSP00000105843 Ensembl ENSMUSP00000073117 Ensembl ENSMUSP00000073973 Ensembl ENSMUSP00000092116

Sequences

Sequence LengthMass (Da)Tools
D3YUB7 [UniParc].

Last modified January 9, 2013. Version 3.
Checksum: EE1C6BDAA17B2490

FASTA55866,207
        10         20         30         40         50         60 
NAVTYEDVHV NFTQEEWALL DPSQKTLYKD VMLETFRNLN AIGFNWEAQN IEEYCQSSRR 

        70         80         90        100        110        120 
HRRCERSQSA EKPSEYTQRD KAFALHDHSH AQRHERVHTE KIPSEVIHCV EDFLPYTSLQ 

       130        140        150        160        170        180 
VHKRTQTGQK PYECNQCGKG FVMPSCLKRH ERFHTGEKPY KCNQCDKAFS QYNNLQTHRR 

       190        200        210        220        230        240 
THTGEKPYKC NQCDKAFSQH STLQTHRRTH TGEKPFKCNQ CDKAFSEKCS LQTHRRTHTG 

       250        260        270        280        290        300 
EKPYKCNQCD KAFSQYSHLH IHRRTHTGEK PLKCNECDET FSNHSNLQTH RRIHTGEKPY 

       310        320        330        340        350        360 
KCNQCDKAFS QHSTLQNHRR THTGEKPFKC NQCDKAFSRH STLQTHRRTH TGEKPFKCNQ 

       370        380        390        400        410        420 
CDKAFSQYSH LHIHRRTHTG EKPFKCNQCN KAFSQYSHLH IHRRTHTGEK PYKCNQCDKT 

       430        440        450        460        470        480 
FSNHSTLQTH RRTHTGEKPY KCNQCDKAFS RHSTLQTHRR THTGEKPFKC NQCDKAFSQK 

       490        500        510        520        530        540 
CSLQKHIRIH TGEKLYKCNE CDKAFSQHST LQTHRRTHTG EKPFKFNECD EGFSHHYNLQ 

       550 
IHERRHTREK PYKCIQCV

« Hide

References

« Hide 'large scale' references
[1]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000075552 Ensembl ENSMUSP00000099083 Ensembl ENSMUSP00000103623 Ensembl ENSMUSP00000134517 Ensembl ENSMUSP00000080837 Ensembl ENSMUSP00000105843 Ensembl ENSMUSP00000073117 Ensembl ENSMUSP00000073973 Ensembl ENSMUSP00000092116.
[2]Ensembl
Submitted (MAY-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000080837 Ensembl ENSMUSP00000092116.
[3]Ensembl
Submitted (JUN-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000073973.
[4]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000099083 Ensembl ENSMUSP00000103623 Ensembl ENSMUSP00000105843 Ensembl ENSMUSP00000073117.
[5]Ensembl
Submitted (SEP-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000134517.
[6]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000075552.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CT573034 Genomic DNA. No translation available.
IPIIPI00127013.
IPI00330310.
IPI00938541.
IPI00957089.
IPI00974793.
IPI00975178.
IPI00989429.
IPI01008112.
UniGeneMm.445930.

3D structure databases

SMRD3YUB7. Positions 1-58, 90-557.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000107989; ENSMUSP00000103623; ENSMUSG00000094942.
UCSCuc007qwu.2. mouse.
uc007qwy.2. mouse.
uc007qzs.1. mouse.
uc007rfh.1. mouse.

Organism-specific databases

MGIMGI:3643456. Gm6871.
MGI:3645327. Gm7221.
MGI:1345179. Zfp120.
MGI:2678025. Zfp640.
MGI:2385315. Zfp825.
MGI:1924367. Zfp934.

Phylogenomic databases

GeneTreeENSGT00700000104772.
HOGENOMHOG000234617.
HOVERGENHBG018163.
OMAGHLRTHE.
METIPIN.
NTLKTHR.
RIHTAHR.
RTAAKSG.

Family and domain databases

Gene3D3.30.160.60. 16 hits.
InterProIPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamPF01352. KRAB. 1 hit.
[Graphical view]
SMARTSM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 15 hits.
[Graphical view]
SUPFAMSSF109640. Krueppel-associated_box. 1 hit.
PROSITEPS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 14 hits.
PS50157. ZINC_FINGER_C2H2_2. 15 hits.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSZfp825. mouse.
NextBio35548570.
SOURCESearch...

Entry information

Entry nameD3YUB7_MOUSE
AccessionPrimary (citable) accession number: D3YUB7
Secondary accession number(s): E9PZ83 expand/collapse secondary AC list , E9Q375, E9QAC5, F6SYQ3, F6YL11, F8VQA3, G3UZJ1
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: January 9, 2013
Last modified: May 29, 2013
This is version 30 of the entry and version 3 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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