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Protein
Submitted name:

Ephrin-A1

Gene

Efna1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Ephrin-A1Imported
Gene namesi
Name:Efna1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 3

Organism-specific databases

MGIiMGI:103236. Efna1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

MembraneUniRule annotation

PTM / Processingi

Proteomic databases

MaxQBiD3YTT5.
PaxDbiD3YTT5.
PeptideAtlasiD3YTT5.

Expressioni

Gene expression databases

BgeeiENSMUSG00000027954.
ExpressionAtlasiD3YTT5. baseline and differential.
GenevisibleiD3YTT5. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000029566.

Structurei

3D structure databases

ProteinModelPortaliD3YTT5.
SMRiD3YTT5. Positions 1-84.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 9898Ephrin RBD (ephrin receptor-binding)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ephrin family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3858. Eukaryota.
ENOG4111FMJ. LUCA.
GeneTreeiENSGT00390000015107.
HOGENOMiHOG000234373.

Family and domain databases

Gene3Di2.60.40.420. 1 hit.
InterProiIPR008972. Cupredoxin.
IPR031328. Ephrin.
IPR019765. Ephrin_CS.
IPR001799. Ephrin_RBD.
[Graphical view]
PANTHERiPTHR11304. PTHR11304. 1 hit.
PfamiPF00812. Ephrin. 1 hit.
[Graphical view]
PRINTSiPR01347. EPHRIN.
ProDomiPD002533. Ephrin. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF49503. SSF49503. 1 hit.
PROSITEiPS01299. EPHRIN_RBD_1. 1 hit.
PS51551. EPHRIN_RBD_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3YTT5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MERYTLYMVE HQEYVACQPQ SKDQVRWNCN RPSAKHGPEK LSEKFQRFTP
60 70 80 90 100
FILGKEFKEG HSYYYISKPI YHQESQCLKL KVTVNGKITH NPQAHVNPQE
110 120 130 140
KRLQADDPEV QVLHSIGYSA APRLFPLVWA VLLLPLLLLQ SQ
Length:142
Mass (Da):16,590
Last modified:April 20, 2010 - v1
Checksum:iA9FB98A24ECB2FCC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC132327 Genomic DNA. No translation available.
RefSeqiNP_001155897.1. NM_001162425.1.
UniGeneiMm.15675.

Genome annotation databases

EnsembliENSMUST00000118587; ENSMUSP00000112904; ENSMUSG00000027954.
GeneIDi13636.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC132327 Genomic DNA. No translation available.
RefSeqiNP_001155897.1. NM_001162425.1.
UniGeneiMm.15675.

3D structure databases

ProteinModelPortaliD3YTT5.
SMRiD3YTT5. Positions 1-84.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000029566.

Proteomic databases

MaxQBiD3YTT5.
PaxDbiD3YTT5.
PeptideAtlasiD3YTT5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000118587; ENSMUSP00000112904; ENSMUSG00000027954.
GeneIDi13636.

Organism-specific databases

CTDi1942.
MGIiMGI:103236. Efna1.

Phylogenomic databases

eggNOGiKOG3858. Eukaryota.
ENOG4111FMJ. LUCA.
GeneTreeiENSGT00390000015107.
HOGENOMiHOG000234373.

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000027954.
ExpressionAtlasiD3YTT5. baseline and differential.
GenevisibleiD3YTT5. MM.

Family and domain databases

Gene3Di2.60.40.420. 1 hit.
InterProiIPR008972. Cupredoxin.
IPR031328. Ephrin.
IPR019765. Ephrin_CS.
IPR001799. Ephrin_RBD.
[Graphical view]
PANTHERiPTHR11304. PTHR11304. 1 hit.
PfamiPF00812. Ephrin. 1 hit.
[Graphical view]
PRINTSiPR01347. EPHRIN.
ProDomiPD002533. Ephrin. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF49503. SSF49503. 1 hit.
PROSITEiPS01299. EPHRIN_RBD_1. 1 hit.
PS51551. EPHRIN_RBD_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiD3YTT5_MOUSE
AccessioniPrimary (citable) accession number: D3YTT5
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 7, 2016
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.