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Protein
Submitted name:

Protein spinster homolog 1

Gene

Spns1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. sphingolipid transporter activity Source: GO_Central

GO - Biological processi

  1. lipid transport Source: GOC
  2. locomotion Source: GO_Central
  3. sphingosine-1-phosphate signaling pathway Source: GO_Central
  4. transmembrane transport Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein spinster homolog 1Imported
Gene namesi
Name:Spns1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 7

Organism-specific databases

MGIiMGI:1920908. Spns1.

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
  2. lysosomal membrane Source: MGI
  3. vesicle Source: GO_Central
Complete GO annotation...

PTM / Processingi

Proteomic databases

MaxQBiD3YTR6.
PRIDEiD3YTR6.

Expressioni

Gene expression databases

BgeeiD3YTR6.
ExpressionAtlasiD3YTR6. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliD3YTR6.
SMRiD3YTR6. Positions 368-395.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000005976.
HOGENOMiHOG000276167.

Family and domain databases

InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3YTR6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGSDTAPFL SQADDPDDGP APGHPGLPGP MGNPKSGELE VPDCEGLQRI
60 70 80 90 100
TGLSRGHSTL IVVVLCYINL LNYMDRFTVA GVLTDIEQFF NIGDGSTGLI
110 120 130 140 150
QTVFISSYMV LAPVFGYLGD RYNRKYLMCG GIAFWSLVTL GSSFIPREHF
160 170 180 190 200
WLLLLTRGLV GVGEASYSTI APTLIADLFV ADQRSRMLSI FYFAIPVGSG
210 220 230 240 250
LGYIAGSKVK DVAGDWHWAL RVTPGLGVLA VLLLFLVVQE PPRGAVERHS
260 270 280 290 300
GSPPLSPTSW WADLKALARN LIFGLITCLT GVLGVGLGVE ISRRLRRFNP
310 320 330 340 350
RADPLVCAAG LLGSAPFLFL ALACARGSIV ATYIFIFIGE TLLSMNWAIV
360 370 380 390 400
ADILLYVVIP TRRSTAEAFQ IVLSHLLGDA GSPYLIGLIS DRLRRSWPPS
410 420 430 440 450
FLSEFRALQF SLMLCAFVGA LGGAAFLGTA MFIEDDRRRA QLHVQGLLHE
460 470
SGPSDDRIVV PQRGRSTRVP VSSVLI
Length:476
Mass (Da):51,396
Last modified:April 20, 2010 - v1
Checksum:iA4DB3555CECC2F48
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC125322 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSMUST00000119846; ENSMUSP00000112954; ENSMUSG00000030741.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC125322 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliD3YTR6.
SMRiD3YTR6. Positions 368-395.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiD3YTR6.
PRIDEiD3YTR6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000119846; ENSMUSP00000112954; ENSMUSG00000030741.

Organism-specific databases

MGIiMGI:1920908. Spns1.

Phylogenomic databases

GeneTreeiENSGT00390000005976.
HOGENOMiHOG000276167.

Miscellaneous databases

ChiTaRSiSpns1. mouse.
NextBioi35548458.
SOURCEiSearch...

Gene expression databases

BgeeiD3YTR6.
ExpressionAtlasiD3YTR6. baseline and differential.

Family and domain databases

InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  2. Ensembl
    Submitted (MAY-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiD3YTR6_MOUSE
AccessioniPrimary (citable) accession number: D3YTR6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: March 4, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.