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Protein
Submitted name:

Target of Nesh-SH3

Gene

ABI3BP

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Target of Nesh-SH3Imported
Gene namesi
Name:ABI3BPImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 3

Organism-specific databases

HGNCiHGNC:17265. ABI3BP.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828Sequence analysisAdd
BLAST
Chaini29 – 17771749Sequence analysisPRO_5003052914Add
BLAST

Expressioni

Gene expression databases

BgeeiD3YTG3.
ExpressionAtlasiD3YTG3. baseline and differential.

Structurei

3D structure databases

ProteinModelPortaliD3YTG3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini123 – 22199Fibronectin type-IIIInterPro annotationAdd
BLAST
Domaini1542 – 163594Fibronectin type-IIIInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

GeneTreeiENSGT00530000063558.
HOGENOMiHOG000065723.
OMAiTSIMLEI.
OrthoDBiEOG7MH0XD.
PhylomeDBiD3YTG3.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiIPR003961. FN3_dom.
IPR013783. Ig-like_fold.
[Graphical view]
PfamiPF00041. fn3. 1 hit.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 2 hits.
PROSITEiPS50853. FN3. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3YTG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRGGKCNMLS SLGCLLLCGS ITLALGNAQK LPKGKRPNLK VHINTTSDSI
60 70 80 90 100
LLKFLRPSPN VKLEGLLLGY GSNVSPNQYF PLPAEGKFTE AIVDAEPKYL
110 120 130 140 150
IVVRPAPPPS QKKSCSGKTR SRKPLQLVVG TLTPSSVFLS WGFLINPHHD
160 170 180 190 200
WTLPSHCPND RFYTIRYREK DKEKKWIFQI CPATETIVEN LKPNTVYEFG
210 220 230 240 250
VKDNVEGGIW SKIFNHKTVV GSKKVNGKIQ STYDQDHTVP AYVPRKLIPI
260 270 280 290 300
TIIKQVIQNV THKDSAKSPE KAPLGGVILV HLIIPGLNET TVKLPASLMF
310 320 330 340 350
EISDALKTQL AKNETLALPA ESKTPEVEKI SARPTTVTPE TVPRSTKPTT
360 370 380 390 400
SSALDVSETT LVLSKRTPET LQTILIPQFE LPLSTLAPKS LPEFPEAKTP
410 420 430 440 450
FPFEKPRGTL ASSEKPWIVP TAKISEDSKV LQPQTATYDV FSSPTTSDEP
460 470 480 490 500
EISDSYTATS DRILDSIPPK TSRTLEQPRA TLAPSETPFV PQKLEIFTSP
510 520 530 540 550
EMQPTTPAPQ QTTSIPSTPK RRPRPKPPRT KPERTTSAGT ITPKISKSPE
560 570 580 590 600
PTWTTPAPGK TQFISLKPKI PLSPEVTHTK PAPEPQTLLP SQSTIGPETP
610 620 630 640 650
GTKPSTTLAP RKTKRPGRRP RPRPRPKTTP SPEVPKSKPA LEPATIQPEP
660 670 680 690 700
LVPTTASKPS ERPKTTHRPD APQIQPGSKP PKQLLPKPQT TAEPDMPPTK
710 720 730 740 750
SVSEPVPFET EAPSMTIVPT TDIEPVTVRT EATVTTLAPK TSQRTRTRRP
760 770 780 790 800
RPKHKTTPRP ETLQTKLDFG PITPGTSSAP TTTTKRTRRP HPKPKTTPHP
810 820 830 840 850
EVPQTKLVPA TILEPVLRTE ASGTTAAPKV PQRTHRPHPK PKTTLSPEEL
860 870 880 890 900
QTELVPATIF EPVSPIKEAP GTTFVPVTDL EPVTFRTEIP ATTLATKTSK
910 920 930 940 950
RTRPPRPRPK TTPSPQAPET KPVPATVLEP VTLRPEASTT LASKTSQRTR
960 970 980 990 1000
RPRLRTKTTP RPEAPESKPV PTAELKPVTL RTETWVTTQA PKTSQRTRRP
1010 1020 1030 1040 1050
RPKTKTTPSP EVPQTKLVPS TDLEPGTLRT EAPKTMVVTT VLEPDTFRTK
1060 1070 1080 1090 1100
FPETTLAPKT QRTRRPRPRP KTTSSPEVPQ NKSVSVTGFE PVVHSTDAPG
1110 1120 1130 1140 1150
TTFALTELQT LILKPVTSPS LEMTESQPVS DVLESVTLST ESPKETIAPA
1160 1170 1180 1190 1200
KTDYVYPTAK APLWPEEPKT EVVESITYVS EPPETTLETS PLPSQSITLP
1210 1220 1230 1240 1250
SPDEPQTEPA PKQTPRAPPK PKTSPRPRIP QTQPVPKVPQ RVTAKPKTSP
1260 1270 1280 1290 1300
SPEVSYTTPA PKDVLLPHKP YPEVSQSEPA PLETRGIPFI PMISPSPSQE
1310 1320 1330 1340 1350
ELQTTLEETD QSTQEPFTTK IPRTTELAKT TQAPHRFYTT VRPRTSDKPH
1360 1370 1380 1390 1400
IRPVLNRTTT RPTRPKPSGM PSGNGVGTGV KQAPRPSGAD RNVSVDSTHP
1410 1420 1430 1440 1450
TKKPGTRRPP LPPRPTHPRR KPLPPNNVTG KPGSAGIISS GPITTPPLRS
1460 1470 1480 1490 1500
TPRPTGTPLE RIETDIKQPT VPASGEELEN ITDFSSSPTR ETDPLGKPRF
1510 1520 1530 1540 1550
KGPHVRYIQK PDNSPCSITD SVKRFPKEEA TEGNATSPPQ NPPTNLTVVT
1560 1570 1580 1590 1600
VEGCPSFVIL DWEKPLNDTV TEYEVISREN GSFSGKNKSI QMTNQTFSTV
1610 1620 1630 1640 1650
ENLKPNTSYE FQVKPKNPLG EGPVSNTVAF STESADPRVS EPVSAGRDAI
1660 1670 1680 1690 1700
WTERPFNSDS YSECKGKQYV KRTWYKKFVG VQLCNSLRYK IYLSDSLTGK
1710 1720 1730 1740 1750
FYNIGDQRGH GEDHCQFVDS FLDGRTGQQL TSDQLPIKEG YFRAVRQEPV
1760 1770
QFGEIGGHTQ INYVQWYECG TTIPGKW
Length:1,777
Mass (Da):195,324
Last modified:April 20, 2010 - v1
Checksum:i46405D5C1318EEAF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC068763 Genomic DNA. No translation available.
AC069223 Genomic DNA. No translation available.
AC080014 Genomic DNA. No translation available.
AC093009 Genomic DNA. No translation available.
AC106721 Genomic DNA. No translation available.
RefSeqiXP_005247340.1. XM_005247283.2.
UniGeneiHs.477015.

Genome annotation databases

EnsembliENST00000471714; ENSP00000420524; ENSG00000154175.
GeneIDi25890.
UCSCiuc003duj.4. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC068763 Genomic DNA. No translation available.
AC069223 Genomic DNA. No translation available.
AC080014 Genomic DNA. No translation available.
AC093009 Genomic DNA. No translation available.
AC106721 Genomic DNA. No translation available.
RefSeqiXP_005247340.1. XM_005247283.2.
UniGeneiHs.477015.

3D structure databases

ProteinModelPortaliD3YTG3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000471714; ENSP00000420524; ENSG00000154175.
GeneIDi25890.
UCSCiuc003duj.4. human.

Organism-specific databases

CTDi25890.
HGNCiHGNC:17265. ABI3BP.
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00530000063558.
HOGENOMiHOG000065723.
OMAiTSIMLEI.
OrthoDBiEOG7MH0XD.
PhylomeDBiD3YTG3.

Miscellaneous databases

ChiTaRSiABI3BP. human.
GenomeRNAii25890.

Gene expression databases

BgeeiD3YTG3.
ExpressionAtlasiD3YTG3. baseline and differential.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
InterProiIPR003961. FN3_dom.
IPR013783. Ig-like_fold.
[Graphical view]
PfamiPF00041. fn3. 1 hit.
[Graphical view]
SUPFAMiSSF49265. SSF49265. 2 hits.
PROSITEiPS50853. FN3. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The DNA sequence, annotation and analysis of human chromosome 3."
    Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J.
    , Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.Z., Steffen D., Wei S., Wheeler D.A., Wright M.W., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P., Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H., Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J., Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W., Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.V., Okwuonu G.O., Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B., Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H., Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J., Wang J., Wang Q., Williams G.A., Wong G.K., Yao Z., Zhang J., Zhang X., Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R., Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.
    Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiD3YTG3_HUMAN
AccessioniPrimary (citable) accession number: D3YTG3
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 8, 2016
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.