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D3VH32 (D3VH32_XENNA) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length879 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 SAAS SAAS021135

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS018129

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS018129

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1371 By similarity HAMAP-Rule MF_00595
Active site5451 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
D3VH32 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 81E50940A6F8C677

FASTA87998,605
        10         20         30         40         50         60 
MNQQYSAMRS NVSMLGKLLG DTIKEALGED ILDKVETIRK LSKSSRAGNE VHRQQLLSTL 

        70         80         90        100        110        120 
ENLSNDELLP VARAFNQFLN LANAAEQYHS ISPHGEAASN PVALAALFNR LKDKQFSNDD 

       130        140        150        160        170        180 
LVKAIDELAI ELVLTAHPTE IARRTLIHKL VEVNGCLAQL DHDDLADYER NNIMRRLRQL 

       190        200        210        220        230        240 
IAQSWHTDEI RKIRPTPIDE AKWGFAVVEN SLWEGVPAFL REFNEQLEES IGYSLPVEAV 

       250        260        270        280        290        300 
PVRFTSWMGG DRDGNPNVTA DITRHVLLLS RWKAADLFLK DIQILVSELS MSECTPEVRQ 

       310        320        330        340        350        360 
MAGGDHVLEP YREIAKQLRT QLSHTLAYLE KCLKGEQVLP PSDLLLHNEQ LWQPLYACYQ 

       370        380        390        400        410        420 
SLKACGMEII ANGQLLDTLR RIRCFGLCLV RIDIRQESTR HTDAIAELTQ YLEMGDYASW 

       430        440        450        460        470        480 
PEAEKQAFLL HELNSKRPLT PRDWQPSAET QEVFETCKVI AETPQDAIAA YVISMAKVPS 

       490        500        510        520        530        540 
DVLAVKLLLK EAGCSLSLPV APLFETLDDL NNAESVIRKL LGITWYRELI QDKQMVMIGY 

       550        560        570        580        590        600 
SDSAKDAGVM AASWAQYQAQ DALIKVCEQE GVTLTLFHGR GGTIGRGGAP AHSALLSQPP 

       610        620        630        640        650        660 
GSLKGGLRVT EQGEMIRFKF GLPQVAISSL ALYASAILEA NLLPPPEPKP EWRQIMGILS 

       670        680        690        700        710        720 
DVSCNMYRDY VREQPEFVPY FRAATPEQEL AKLPLGSRPA KRRPTGGVES LRAIPWIFAW 

       730        740        750        760        770        780 
TQNRLMLPTW LGAGAALQQV IDAGKLSVLT DMSRDWPFFN TRIAMLEMVF AKADLWLAEY 

       790        800        810        820        830        840 
YDQRLVDPKL WPLGLKLRNQ LAEDIKTVLT ISQDEQLMAD LPWIAESIAL RNVYTDPLNV 

       850        860        870 
LQVELLQRSR QQEEALDPHL EQALMVTIAG VAAGMRNTG 

« Hide

References

[1]"Complete genome sequence of Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)."
Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S., Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P., Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S., Suen G.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6.
[2]"The entomopathogenic bacterial endosymbionts xenorhabdus and photorhabdus: convergent lifestyles from divergent genomes."
Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E., Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C., de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E., Jewell K.A., Knack J.J. expand/collapse author list , Krasomil-Osterfeld K.C., Kukor R., Lanois A., Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X., Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M., Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D., Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z., Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R., Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S., Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.
PLoS ONE 6:e27909-e27909(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN667742 Genomic DNA. Translation: CBJ88317.1.
RefSeqYP_003710569.1. NC_014228.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBJ88317; CBJ88317; XNC1_0229.
GeneID9433012.
KEGGxne:XNC1_0229.
PATRIC42460393. VBIXenNem38452_0215.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000238648.
KOK01595.

Enzyme and pathway databases

BioCycXNEM406817:GHY4-226-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3VH32_XENNA
AccessionPrimary (citable) accession number: D3VH32
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 11, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)