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D3VEI5

- D3VEI5_XENNA

UniProt

D3VEI5 - D3VEI5_XENNA

Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

XNC1_2037

Organism
Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. pyridoxal phosphate binding Source: InterPro
    2. sulfinoalanine decarboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationImported

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciXNEM406817:GHY4-2038-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pyridoxal-dependent decarboxylaseImported (EC:4.1.1.29Imported)
    Gene namesi
    Ordered Locus Names:XNC1_2037Imported
    OrganismiXenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)Imported
    Taxonomic identifieri406817 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeXenorhabdus
    ProteomesiUP000008075: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000282553.
    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR018247. EF_Hand_1_Ca_BS.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
    PROSITEiPS00018. EF_HAND_1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D3VEI5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLHFLDSLNR DEADKMTPDT SCVNEQEWQA LLNQFISHVD GEKLLELETG    50
    IAGDPVTYCR RELNKPVCEL TELEKLFSCV TIPEFPVETE SYVRHLGEDV 100
    FNQVVPVSSP AFVGHMTSAL PNHLPALSKI LTALNQNLVK LETSHVLTAL 150
    ERQVLGMMHK LVYHRDDDFY HQWLHNGDHA LATFCSGGTL ANLTAMWACR 200
    NKLMPAEGDF AGLAREGLAR GLLHYGYNGL AILVSELGHY SLKKTVDVLG 250
    LGQDALVKVD TDRNGRICID DLRVQLQSLR ERNIKPMAIV GIAGTTETGA 300
    IDPLDVLADI AEREQCHFHV DAAWGGASLL SERYRHLFAG IERADTVTID 350
    AHKQMYVPMG AGMVLFRQPT LSDAIAQHAN YIVRKGSKDL GRHTLEGSRS 400
    AMSLMLHSNF HLLGRRGLGH LIDAGIEKAQ QFADLIRQQE DFELISEPQL 450
    CLLTYRYVSQ EMLQTLREGS ETVKQKLYEA LNALNQSIQT MQWTAGHSFV 500
    SRTCLRPPQW ARQPTIVFRV VLANPLTTLE ILENMLQEQR QLAQQSPYWQ 550
    ALQDLFPIKY DS 562
    Length:562
    Mass (Da):63,158
    Last modified:April 20, 2010 - v1
    Checksum:iAF543C69B74D8593
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN667742 Genomic DNA. Translation: CBJ90097.1.
    RefSeqiWP_013184215.1. NC_014228.1.
    YP_003712277.1. NC_014228.1.

    Genome annotation databases

    EnsemblBacteriaiCBJ90097; CBJ90097; XNC1_2037.
    GeneIDi9433153.
    KEGGixne:XNC1_2037.
    PATRICi42463796. VBIXenNem38452_1867.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN667742 Genomic DNA. Translation: CBJ90097.1 .
    RefSeqi WP_013184215.1. NC_014228.1.
    YP_003712277.1. NC_014228.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBJ90097 ; CBJ90097 ; XNC1_2037 .
    GeneIDi 9433153.
    KEGGi xne:XNC1_2037.
    PATRICi 42463796. VBIXenNem38452_1867.

    Phylogenomic databases

    HOGENOMi HOG000282553.
    KOi K01580.

    Enzyme and pathway databases

    BioCyci XNEM406817:GHY4-2038-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR018247. EF_Hand_1_Ca_BS.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    PROSITEi PS00018. EF_HAND_1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)."
      Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S., Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P., Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S., Suen G.
      Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6Imported.
    2. "The entomopathogenic bacterial endosymbionts xenorhabdus and photorhabdus: convergent lifestyles from divergent genomes."
      Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E., Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C., de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E., Jewell K.A., Knack J.J.
      , Krasomil-Osterfeld K.C., Kukor R., Lanois A., Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X., Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M., Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D., Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z., Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R., Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S., Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.
      PLoS ONE 6:e27909-e27909(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6Imported.

    Entry informationi

    Entry nameiD3VEI5_XENNA
    AccessioniPrimary (citable) accession number: D3VEI5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3