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D3VD71 (D3VD71_XENNA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length192 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
   Molecular functionOxidoreductase RuleBase RU000414 EMBL CBJ89937.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

superoxide dismutase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3VD71 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: DF096489FF9BFA95

FASTA19221,641
        10         20         30         40         50         60 
MSFELPALPY AKDALEPHIS AETLEYHYGK HHNAYVVNLN NLVKDTELAG KSLEEIIKTS 

        70         80         90        100        110        120 
EGGIFNNAAQ VWNHTFYWHC LSPNGGSEPT GKVADAINSA FGSFAEFKQQ FTDAALKNFG 

       130        140        150        160        170        180 
SGWTWLVKKT DDNLAIVNTS NAATPLTGED KPVLTVDVWE HAYYIDYRNA RPQYLEHFWA 

       190 
LVNWKFVEEN LA

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References

[1]"Complete genome sequence of Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)."
Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S., Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P., Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S., Suen G.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FN667742 Genomic DNA. Translation: CBJ89937.1.
RefSeqYP_003712121.1. NC_014228.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBJ89937; CBJ89937; XNC1_1877.
GeneID9433320.
KEGGxne:XNC1_1877.
PATRIC42463518. VBIXenNem38452_1729.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000013584.
KOK04564.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SODismutase. 1 hit.
SSF54719. SODismutase. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3VD71_XENNA
AccessionPrimary (citable) accession number: D3VD71
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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