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D3VA41 (D3VA41_XENNA) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length695 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
D3VA41 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 93DE1D69B596DB7F

FASTA69575,802
        10         20         30         40         50         60 
MSIKKHLTKL QQGQSLLEKG KQATGLAKQA AGLPGGAGTA GLTDKSGLMK PGGFAGPLSG 

        70         80         90        100        110        120 
GQSLVQQATA GHSGAARALQ QAGVGGDSAP GGLRFTLTAG SLPPQTFVVT DFTLNEGFSR 

       130        140        150        160        170        180 
LFTLNVGLAS ADPAIDFPSV LDRSATLTIT QDGKEQRSLS GCVARFEQGN TGLHQTTYQM 

       190        200        210        220        230        240 
TICPDLWRTS LRQNSRIFQQ QDIVTILTTL LKEHGIRDVV FSLRQPHPAR EFCVQYQESD 

       250        260        270        280        290        300 
FDFLQRLTAE EGIFYFFECG NGRNTLVFAD DAGSVPPGIM LPYQPGDIST TGEPSVTSFT 

       310        320        330        340        350        360 
SSAQVRPARV ELKDYTFKNP AWPAEFREQM KDEQLQEQYY EHYDYPGRFK DEAHGKAFTR 

       370        380        390        400        410        420 
YRLEALRNDA ITGQGHGHAI AIQPGKLFIL TNHPRDDLNQ PWQVVSASHT GNQPGALETA 

       430        440        450        460        470        480 
TGDSGTTLHS QFSFIRHNQH WRPTPLPKPG IDGPQIAKVV GPAGEEIFCD QYGRIRLQFP 

       490        500        510        520        530        540 
WDRYGKSDDQ SSCWIRVTQP WAGQGWGMLA IPRIGQEVVV DFLHGDPDQP IVTGRTYHAS 

       550        560        570        580        590        600 
NIPPGGLPGS KTQMAFRSKT HKGEGYNELL FEDAKGSEKL SLHAQKDMDT TVLNDRSTRV 

       610        620        630        640        650        660 
MHDHTESVGH NQAISVRADR HKEVVGMEVS SIGTRQVTVE KTSVLSVKGQ ITIQSTESGI 

       670        680        690 
TIGNTKGSIS IDTDGNIHIT GNTVIINGKE VITLN 

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References

[1]"Complete genome sequence of Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)."
Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S., Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P., Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S., Suen G.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN667742 Genomic DNA. Translation: CBJ91605.1.
RefSeqYP_003713711.1. NC_014228.1.

3D structure databases

ProteinModelPortalD3VA41.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBJ91605; CBJ91605; XNC1_3571.
GeneID9431588.
KEGGxne:XNC1_3571.
PATRIC42466636. VBIXenNem38452_3267.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148858.
KOK11904.

Family and domain databases

Gene3D2.40.50.230. 1 hit.
InterProIPR006531. Gp5_N-like_dom.
IPR006533. Rhs_Vgr.
IPR017847. T6SS_Rhs-element_Vgr.
[Graphical view]
PfamPF04717. Phage_base_V. 1 hit.
[Graphical view]
TIGRFAMsTIGR01646. vgr_GE. 1 hit.
TIGR03361. VI_Rhs_Vgr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3VA41_XENNA
AccessionPrimary (citable) accession number: D3VA41
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)