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D3V6U9 (D3V6U9_XENBS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595

Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595
Gene names
Name:ppc HAMAP-Rule MF_00595 EMBL CBJ83378.1
Ordered Locus Names:XBJ1_4275 EMBL CBJ83378.1
OrganismXenorhabdus bovienii (strain SS-2004) [Complete proteome] [HAMAP] EMBL CBJ83378.1
Taxonomic identifier406818 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeXenorhabdus

Protein attributes

Sequence length878 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 SAAS SAAS021135

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS018129

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS018129

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1371 By similarity HAMAP-Rule MF_00595
Active site5451 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
D3V6U9 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: D6618FB5E0E06858

FASTA87898,568
        10         20         30         40         50         60 
MNQQYSAMRS NVSMLGKLLG NTIKEALGES ILDKVETIRK LSKSSRAGNE ADRQQLLSTL 

        70         80         90        100        110        120 
QNLSNDELLP VARAFNQFLN LANVAEQYHS ISPHGEAASN PVALEALFNR LKDKKFSNDD 

       130        140        150        160        170        180 
LINAVNELAI ELVLTAHPTE IARRTLIHKL VEVNACLSQL DHDDLADYER INIMRRLRQL 

       190        200        210        220        230        240 
IAQSWHTDEI RKIRPTPIDE AKWGFAVVEN SLWEGVPAFL REFNEQLEES IGYSLPVEAV 

       250        260        270        280        290        300 
PIRFTSWMGG DRDGNPNVTA EITRHVLLLS RWKAADLFLK DIQVLVSELS MSECTPELRQ 

       310        320        330        340        350        360 
LAGGDGVLEP YREIAKQLRT QLNSTLTYLE KHLKGERVLP PVGLLLHNEQ LWQPLYACYQ 

       370        380        390        400        410        420 
SLKTCGMEII ANGQLLDTLR RIRCFGLSLV RIDIRQESTR HTDAIAELTQ YLELGDYASW 

       430        440        450        460        470        480 
SETEKQTFLL RELNSKRPLI PHCWQPSEET LEVFETCKVI AESPQDAIAA YVISMAKVPS 

       490        500        510        520        530        540 
DVLAVKLLLK EAGCSLKLPV APLFETLDDL NNAESVIQQL LGIGWYRELI QDKQMVMIGY 

       550        560        570        580        590        600 
SDSAKDAGVM AASWAQYRAQ DALIKVCEQE SVTLTLFHGR GGTIGRGGAP AHSALLSQPP 

       610        620        630        640        650        660 
GSLKGGLRVT EQGEMIRFKF GLPQVTISSL ALYASAILEA NLLPPPEPKP EWKQVMDTLS 

       670        680        690        700        710        720 
DVSCDMYRDY VREQPEFVPY FRAATPEQEL AKLPLGSRPA KRRPTGGVES LRAIPWIFAW 

       730        740        750        760        770        780 
TQNRLMLPAW LGAGAALQHV IDAGKLSVLA DMCRDWPFFN TRIAMLEMVF AKADLWLAEY 

       790        800        810        820        830        840 
YDQRLVDKKL WPLGITLRNQ LAEDIKTVLT ISQDEQLMAD LPWIAESIAL RNVYTDPLNV 

       850        860        870 
LQAELLQRSR QQEQPDPHLE QALMVTIAGV AAGMRNTG 

« Hide

References

[1]"Complete genome sequence of Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)."
Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S., Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P., Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S., Suen G.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SS-2004.
[2]"The entomopathogenic bacterial endosymbionts xenorhabdus and photorhabdus: convergent lifestyles from divergent genomes."
Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E., Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C., de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E., Jewell K.A., Knack J.J. expand/collapse author list , Krasomil-Osterfeld K.C., Kukor R., Lanois A., Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X., Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M., Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D., Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z., Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R., Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S., Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.
PLoS ONE 6:e27909-e27909(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SS-2004 EMBL CBJ83378.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN667741 Genomic DNA. Translation: CBJ83378.1.
RefSeqYP_003470136.1. NC_013892.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBJ83378; CBJ83378; XBJ1_4275.
GeneID8833908.
KEGGxbo:XBJ1_4275.
PATRIC35303115. VBIXenBov95754_3849.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000238648.
KOK01595.

Enzyme and pathway databases

BioCycXBOV406818:GHLH-4278-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3V6U9_XENBS
AccessionPrimary (citable) accession number: D3V6U9
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 11, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)