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D3V6U9

- D3V6U9_XENBS

UniProt

D3V6U9 - D3V6U9_XENBS

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Protein

Phosphoenolpyruvate carboxylase

Gene
ppc, XBJ1_4275
Organism
Xenorhabdus bovienii (strain SS-2004)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotationSAAS annotations

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei137 – 1371 By similarityUniRule annotation
Active sitei545 – 5451 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciXBOV406818:GHLH-4278-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotationImported
Ordered Locus Names:XBJ1_4275Imported
OrganismiXenorhabdus bovienii (strain SS-2004)Imported
Taxonomic identifieri406818 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeXenorhabdus
ProteomesiUP000002045: Chromosome

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238648.
KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3V6U9-1 [UniParc]FASTAAdd to Basket

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MNQQYSAMRS NVSMLGKLLG NTIKEALGES ILDKVETIRK LSKSSRAGNE    50
ADRQQLLSTL QNLSNDELLP VARAFNQFLN LANVAEQYHS ISPHGEAASN 100
PVALEALFNR LKDKKFSNDD LINAVNELAI ELVLTAHPTE IARRTLIHKL 150
VEVNACLSQL DHDDLADYER INIMRRLRQL IAQSWHTDEI RKIRPTPIDE 200
AKWGFAVVEN SLWEGVPAFL REFNEQLEES IGYSLPVEAV PIRFTSWMGG 250
DRDGNPNVTA EITRHVLLLS RWKAADLFLK DIQVLVSELS MSECTPELRQ 300
LAGGDGVLEP YREIAKQLRT QLNSTLTYLE KHLKGERVLP PVGLLLHNEQ 350
LWQPLYACYQ SLKTCGMEII ANGQLLDTLR RIRCFGLSLV RIDIRQESTR 400
HTDAIAELTQ YLELGDYASW SETEKQTFLL RELNSKRPLI PHCWQPSEET 450
LEVFETCKVI AESPQDAIAA YVISMAKVPS DVLAVKLLLK EAGCSLKLPV 500
APLFETLDDL NNAESVIQQL LGIGWYRELI QDKQMVMIGY SDSAKDAGVM 550
AASWAQYRAQ DALIKVCEQE SVTLTLFHGR GGTIGRGGAP AHSALLSQPP 600
GSLKGGLRVT EQGEMIRFKF GLPQVTISSL ALYASAILEA NLLPPPEPKP 650
EWKQVMDTLS DVSCDMYRDY VREQPEFVPY FRAATPEQEL AKLPLGSRPA 700
KRRPTGGVES LRAIPWIFAW TQNRLMLPAW LGAGAALQHV IDAGKLSVLA 750
DMCRDWPFFN TRIAMLEMVF AKADLWLAEY YDQRLVDKKL WPLGITLRNQ 800
LAEDIKTVLT ISQDEQLMAD LPWIAESIAL RNVYTDPLNV LQAELLQRSR 850
QQEQPDPHLE QALMVTIAGV AAGMRNTG 878
Length:878
Mass (Da):98,568
Last modified:April 20, 2010 - v1
Checksum:iD6618FB5E0E06858
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN667741 Genomic DNA. Translation: CBJ83378.1.
RefSeqiYP_003470136.1. NC_013892.1.

Genome annotation databases

EnsemblBacteriaiCBJ83378; CBJ83378; XBJ1_4275.
GeneIDi8833908.
KEGGixbo:XBJ1_4275.
PATRICi35303115. VBIXenBov95754_3849.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN667741 Genomic DNA. Translation: CBJ83378.1 .
RefSeqi YP_003470136.1. NC_013892.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBJ83378 ; CBJ83378 ; XBJ1_4275 .
GeneIDi 8833908.
KEGGi xbo:XBJ1_4275.
PATRICi 35303115. VBIXenBov95754_3849.

Phylogenomic databases

HOGENOMi HOG000238648.
KOi K01595.

Enzyme and pathway databases

BioCyci XBOV406818:GHLH-4278-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)."
    Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S., Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P., Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S., Suen G.
    Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SS-2004.
  2. "The entomopathogenic bacterial endosymbionts xenorhabdus and photorhabdus: convergent lifestyles from divergent genomes."
    Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E., Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C., de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E., Jewell K.A., Knack J.J.
    , Krasomil-Osterfeld K.C., Kukor R., Lanois A., Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X., Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M., Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D., Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z., Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R., Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S., Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.
    PLoS ONE 6:e27909-e27909(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SS-2004Imported.

Entry informationi

Entry nameiD3V6U9_XENBS
AccessioniPrimary (citable) accession number: D3V6U9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 11, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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