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D3UYB1

- D3UYB1_XENBS

UniProt

D3UYB1 - D3UYB1_XENBS

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Protein

Glycerol-3-phosphate dehydrogenase

Gene

glpD

Organism
Xenorhabdus bovienii (strain SS-2004)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

Cofactori

Note: FAD.UniRule annotation

GO - Molecular functioni

  1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

GO - Biological processi

  1. glycerol-3-phosphate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationSAAS annotation

Keywords - Ligandi

FlavoproteinUniRule annotation

Enzyme and pathway databases

BioCyciXBOV406818:GHLH-135-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycerol-3-phosphate dehydrogenaseUniRule annotation (EC:1.1.5.3UniRule annotation)
Gene namesi
Name:glpDImported
Ordered Locus Names:XBJ1_0138Imported
OrganismiXenorhabdus bovienii (strain SS-2004)Imported
Taxonomic identifieri406818 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeXenorhabdus
ProteomesiUP000002045: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. glycerol-3-phosphate dehydrogenase complex Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliD3UYB1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000004811.
KOiK00111.

Family and domain databases

InterProiIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamiPF01266. DAO. 1 hit.
[Graphical view]
PRINTSiPR01001. FADG3PDH.
PROSITEiPS00977. FAD_G3PDH_1. 1 hit.
PS00978. FAD_G3PDH_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D3UYB1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
METKDLIVIG GGINGAGIAA DAAGRGLSVL LLEGQDLASA TSSASSKLIH
60 70 80 90 100
GGLRYLEHYE FRLVSEALAE REVLLKLAPH IAFPMRFRLP HQPHLRPAWM
110 120 130 140 150
IRIGLFLYDN LGKRVSLPSS KGLKFGANSV LKPSIRRGFE YSDCWVDDAR
160 170 180 190 200
LVVLNAQEVQ KHGGEVRTRT QVTRAWREKG YWMVEAKDLT TGKTDTWRAK
210 220 230 240 250
GLVNATGPWV KNFFDDGLKL KSPYGIRLIK GSHIVVPRAH DEPQAYILQN
260 270 280 290 300
EDNRIVFVIP WNDEFSIIGT TDVEYKGDPK EVKIDDQEIG YLLKVYNNHF
310 320 330 340 350
KKQLNRSDVV WTYSGVRPLC DDESDSPQAI TRDYTLDVQD EQGQMPLLSV
360 370 380 390 400
FGGKLTTYRK LAEHALEKLV QYYPNAGKAW TKNGKLPGGE LEGHDRDGYA
410 420 430 440 450
RLLRQRHNWL PEGVAQRYAR TYGSNCQIIL KGAEALTDLG EFFGHGLYEA
460 470 480 490 500
ELRYLVEHEW VTQLDDAIWR RTKLGMWLTD EQKQRVADWL AQNVQSSQAQ

S
Length:501
Mass (Da):56,778
Last modified:April 20, 2010 - v1
Checksum:i523749DF9902C0F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN667741 Genomic DNA. Translation: CBJ79289.1.
RefSeqiYP_003466089.1. NC_013892.1.

Genome annotation databases

EnsemblBacteriaiCBJ79289; CBJ79289; XBJ1_0138.
GeneIDi8829762.
KEGGixbo:XBJ1_0138.
PATRICi35295465. VBIXenBov95754_0126.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN667741 Genomic DNA. Translation: CBJ79289.1 .
RefSeqi YP_003466089.1. NC_013892.1.

3D structure databases

ProteinModelPortali D3UYB1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBJ79289 ; CBJ79289 ; XBJ1_0138 .
GeneIDi 8829762.
KEGGi xbo:XBJ1_0138.
PATRICi 35295465. VBIXenBov95754_0126.

Phylogenomic databases

HOGENOMi HOG000004811.
KOi K00111.

Enzyme and pathway databases

BioCyci XBOV406818:GHLH-135-MONOMER.

Family and domain databases

InterProi IPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view ]
Pfami PF01266. DAO. 1 hit.
[Graphical view ]
PRINTSi PR01001. FADG3PDH.
PROSITEi PS00977. FAD_G3PDH_1. 1 hit.
PS00978. FAD_G3PDH_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)."
    Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S., Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P., Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S., Suen G.
    Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SS-2004Imported.
  2. "The entomopathogenic bacterial endosymbionts xenorhabdus and photorhabdus: convergent lifestyles from divergent genomes."
    Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E., Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C., de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E., Jewell K.A., Knack J.J.
    , Krasomil-Osterfeld K.C., Kukor R., Lanois A., Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X., Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M., Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D., Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z., Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R., Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S., Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.
    PLoS ONE 6:e27909-e27909(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SS-2004Imported.

Entry informationi

Entry nameiD3UYB1_XENBS
AccessioniPrimary (citable) accession number: D3UYB1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 26, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3