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D3UYB1 (D3UYB1_XENBS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.5.3 EMBL CBJ79289.1
Gene names
Name:glpD EMBL CBJ79289.1
Ordered Locus Names:XBJ1_0138 EMBL CBJ79289.1
OrganismXenorhabdus bovienii (strain SS-2004) [Complete proteome] [HAMAP] EMBL CBJ79289.1
Taxonomic identifier406818 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeXenorhabdus

Protein attributes

Sequence length501 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

FAD By similarity. RuleBase RU003892

Sequence similarities

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.

Sequences

Sequence LengthMass (Da)Tools
D3UYB1 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 523749DF9902C0F9

FASTA50156,778
        10         20         30         40         50         60 
METKDLIVIG GGINGAGIAA DAAGRGLSVL LLEGQDLASA TSSASSKLIH GGLRYLEHYE 

        70         80         90        100        110        120 
FRLVSEALAE REVLLKLAPH IAFPMRFRLP HQPHLRPAWM IRIGLFLYDN LGKRVSLPSS 

       130        140        150        160        170        180 
KGLKFGANSV LKPSIRRGFE YSDCWVDDAR LVVLNAQEVQ KHGGEVRTRT QVTRAWREKG 

       190        200        210        220        230        240 
YWMVEAKDLT TGKTDTWRAK GLVNATGPWV KNFFDDGLKL KSPYGIRLIK GSHIVVPRAH 

       250        260        270        280        290        300 
DEPQAYILQN EDNRIVFVIP WNDEFSIIGT TDVEYKGDPK EVKIDDQEIG YLLKVYNNHF 

       310        320        330        340        350        360 
KKQLNRSDVV WTYSGVRPLC DDESDSPQAI TRDYTLDVQD EQGQMPLLSV FGGKLTTYRK 

       370        380        390        400        410        420 
LAEHALEKLV QYYPNAGKAW TKNGKLPGGE LEGHDRDGYA RLLRQRHNWL PEGVAQRYAR 

       430        440        450        460        470        480 
TYGSNCQIIL KGAEALTDLG EFFGHGLYEA ELRYLVEHEW VTQLDDAIWR RTKLGMWLTD 

       490        500 
EQKQRVADWL AQNVQSSQAQ S 

« Hide

References

[1]"Complete genome sequence of Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / LMG 1036 / NCIB 9965 / AN6)."
Goodrich-Blair H., Barbazuk B., Bode H.B., Darby C., Du Z., Forst S., Gaudriault S., Goldman B.S., Goodner B., Henkhaus J., Latreille P., Medigue C., Miller N., Norton S., Ogier J.C., Rouy Z., Slater S., Suen G.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SS-2004.
[2]"The entomopathogenic bacterial endosymbionts xenorhabdus and photorhabdus: convergent lifestyles from divergent genomes."
Chaston J.M., Suen G., Tucker S.L., Andersen A.W., Bhasin A., Bode E., Bode H.B., Brachmann A.O., Cowles C.E., Cowles K.N., Darby C., de Leon L., Drace K., Du Z., Givaudan A., Herbert Tran E.E., Jewell K.A., Knack J.J. expand/collapse author list , Krasomil-Osterfeld K.C., Kukor R., Lanois A., Latreille P., Leimgruber N.K., Lipke C.M., Liu R., Lu X., Martens E.C., Marri P.R., Medigue C., Menard M.L., Miller N.M., Morales-Soto N., Norton S., Ogier J.C., Orchard S.S., Park D., Park Y., Qurollo B.A., Sugar D.R., Richards G.R., Rouy Z., Slominski B., Slominski K., Snyder H., Tjaden B.C., van der Hoeven R., Welch R.D., Wheeler C., Xiang B., Barbazuk B., Gaudriault S., Goodner B., Slater S.C., Forst S., Goldman B.S., Goodrich-Blair H.
PLoS ONE 6:e27909-e27909(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SS-2004 EMBL CBJ79289.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN667741 Genomic DNA. Translation: CBJ79289.1.
RefSeqYP_003466089.1. NC_013892.1.

3D structure databases

ProteinModelPortalD3UYB1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBJ79289; CBJ79289; XBJ1_0138.
GeneID8829762.
KEGGxbo:XBJ1_0138.
PATRIC35295465. VBIXenBov95754_0126.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000004811.
KOK00111.

Enzyme and pathway databases

BioCycXBOV406818:GHLH-135-MONOMER.

Family and domain databases

InterProIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamPF01266. DAO. 1 hit.
[Graphical view]
PRINTSPR01001. FADG3PDH.
PROSITEPS00977. FAD_G3PDH_1. 1 hit.
PS00978. FAD_G3PDH_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3UYB1_XENBS
AccessionPrimary (citable) accession number: D3UYB1
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: June 11, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)