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D3URB4 (D3URB4_LISSS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL CBH28485.1
Gene names
Name:gadB3 EMBL CBH28485.1
Ordered Locus Names:lse_2334 EMBL CBH28485.1
OrganismListeria seeligeri serovar 1/2b (strain ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954) [Complete proteome] [HAMAP] EMBL CBH28485.1
Taxonomic identifier683837 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length467 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
D3URB4 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 8772EBCA034AD5A7

FASTA46753,751
        10         20         30         40         50         60 
MLYSENDKRK HESYRIPLFG SDEESTSIPK YVLKKESMEP RIAYQLVKDQ LMDEGNARQN 

        70         80         90        100        110        120 
LATFCQTYME EEAQLLMAET LEKNAIDKSE YPQTAELENR CVNILADLWN APKEMAYLGT 

       130        140        150        160        170        180 
STVGSSEACM LGGLAMKFRW RKKAEERGLD IQAKRPNLII SSGYQVCWEK FCVYWDVDMR 

       190        200        210        220        230        240 
VVPMDKEHLN LDTDRVFELV DEYTIGIVGI LGITYTGKFD DIALLDEKVE AYNKANEHQL 

       250        260        270        280        290        300 
VIHVDGASGA MFTPFMDPEL SWDFRLKNVV SINTSGHKYG LVYPGVGWIL WKDKEYLPKE 

       310        320        330        340        350        360 
LIFEVSYLGG SMPTMAINFS RSASQIIGQY YNFLRFGFEG YREIHEKTKK TALYLAKTVE 

       370        380        390        400        410        420 
KSGYFEIIND GSNLPIVCYK MKEGLDVEWT LYDLADQLLM KGWQVPAYPL PADLSDTIIQ 

       430        440        450        460 
RFVCRADLGY NVAEEFAADF HEALHNLEHA RVLYHDKKRN DSYGFTH 

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References

[1]"Complete genome sequence of Listeria seeligeri, a nonpathogenic member of the genus Listeria."
Steinweg C., Kuenne C.T., Billion A., Mraheil M.A., Domann E., Ghai R., Barbuddhe S.B., Karst U., Goesmann A., Puhler A., Weisshaar B., Wehland J., Lampidis R., Kreft J., Goebel W., Chakraborty T., Hain T.
J. Bacteriol. 192:1473-1474(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN557490 Genomic DNA. Translation: CBH28485.1.
RefSeqYP_003465567.1. NC_013891.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBH28485; CBH28485; lse_2334.
GeneID9082399.
KEGGlsg:lse_2334.
PATRIC32264678. VBILisSee138575_2334.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMANAPKEMS.

Enzyme and pathway databases

BioCycLSEE683837:GI10-2410-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3URB4_LISSS
AccessionPrimary (citable) accession number: D3URB4
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 14, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)