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D3UR50 (D3UR50_LISSS) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL CBH28421.1
Gene names
Name:gadB1 EMBL CBH28421.1
Ordered Locus Names:lse_2270 EMBL CBH28421.1
OrganismListeria seeligeri serovar 1/2b (strain ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954) [Complete proteome] [HAMAP] EMBL CBH28421.1
Taxonomic identifier683837 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
D3UR50 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: B9AC0DD4AEDB3622

FASTA46453,553
        10         20         30         40         50         60 
MLYSKENQES YLEPVFGSSA EDRDIPKYTL GKEPLEPRIA YRLVKDELLD EGSARQNLAT 

        70         80         90        100        110        120 
FCQTYMEDEA TKLMSETLEK NAIDKSEYPR TAELENRCVN IIADLWHAPK DQKFMGTSTI 

       130        140        150        160        170        180 
GSSEACMLGG MAMKFAWRKC AEKLGLDIYA QKPNLVISSG YQVCWEKFCV YWDIDMRIVP 

       190        200        210        220        230        240 
MDKDHMQLNT DQVLDYIDEY TIGVVGILGI TYTGRYDDIY ALNEKIEQYN SQTDYKVYIH 

       250        260        270        280        290        300 
VDAASGGFFT PFVEPDIIWD FRLKNVISIN TSGHKYGLVY PGVGWVLWKD ESYLPKELIF 

       310        320        330        340        350        360 
KVSYLGGEMP TMQINFSRSA SHIIGQYYNF LRYGFEGYRS IHQKTSDVAQ YLANAVEETG 

       370        380        390        400        410        420 
YFDIYNDGSH LPIVCYKLKD NINVNWTLYD LADRLQMRGW QVPAYPLPKN LENIVIQRYV 

       430        440        450        460 
CRADLGFNMA EEFIQDFKTS IEELNNAHIL FHDTQKSGVH GFTH 

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References

[1]"Complete genome sequence of Listeria seeligeri, a nonpathogenic member of the genus Listeria."
Steinweg C., Kuenne C.T., Billion A., Mraheil M.A., Domann E., Ghai R., Barbuddhe S.B., Karst U., Goesmann A., Puhler A., Weisshaar B., Wehland J., Lampidis R., Kreft J., Goebel W., Chakraborty T., Hain T.
J. Bacteriol. 192:1473-1474(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN557490 Genomic DNA. Translation: CBH28421.1.
RefSeqYP_003465503.1. NC_013891.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBH28421; CBH28421; lse_2270.
GeneID9081135.
KEGGlsg:lse_2270.
PATRIC32264506. VBILisSee138575_2267.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMAKIHERTR.

Enzyme and pathway databases

BioCycLSEE683837:GI10-2327-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3UR50_LISSS
AccessionPrimary (citable) accession number: D3UR50
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 14, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)