D3UR50 (D3UR50_LISSS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL CBH28421.1
EC=4.1.1.15 EMBL CBH28421.1

Gene names

Name:	gadB1 EMBL CBH28421.1
Ordered Locus Names:	lse_2270

Organism

Listeria seeligeri serovar 1/2b (strain ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954) [Complete proteome] [HAMAP]

Taxonomic identifier

683837 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Listeriaceae › Listeria › Listeria seeligeri

Protein attributes

Sequence length	464 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL CBH28421.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3UR50 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: B9AC0DD4AEDB3622	FASTA	464	53,553
	10 20 30 40 50 60 MLYSKENQES YLEPVFGSSA EDRDIPKYTL GKEPLEPRIA YRLVKDELLD EGSARQNLAT 70 80 90 100 110 120 FCQTYMEDEA TKLMSETLEK NAIDKSEYPR TAELENRCVN IIADLWHAPK DQKFMGTSTI 130 140 150 160 170 180 GSSEACMLGG MAMKFAWRKC AEKLGLDIYA QKPNLVISSG YQVCWEKFCV YWDIDMRIVP 190 200 210 220 230 240 MDKDHMQLNT DQVLDYIDEY TIGVVGILGI TYTGRYDDIY ALNEKIEQYN SQTDYKVYIH 250 260 270 280 290 300 VDAASGGFFT PFVEPDIIWD FRLKNVISIN TSGHKYGLVY PGVGWVLWKD ESYLPKELIF 310 320 330 340 350 360 KVSYLGGEMP TMQINFSRSA SHIIGQYYNF LRYGFEGYRS IHQKTSDVAQ YLANAVEETG 370 380 390 400 410 420 YFDIYNDGSH LPIVCYKLKD NINVNWTLYD LADRLQMRGW QVPAYPLPKN LENIVIQRYV 430 440 450 460 CRADLGFNMA EEFIQDFKTS IEELNNAHIL FHDTQKSGVH GFTH

References

[1]

"Complete genome sequence of Listeria seeligeri, a nonpathogenic member of the genus Listeria." Steinweg C., Kuenne C.T., Billion A., Mraheil M.A., Domann E., Ghai R., Barbuddhe S.B., Karst U., Goesmann A., Puhler A., Weisshaar B., Wehland J., Lampidis R., Kreft J., Goebel W., Chakraborty T., Hain T. J. Bacteriol. 192:1473-1474(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35967 / DSM 20751 / CIP 100100 / SLCC 3954.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN557490 Genomic DNA. Translation: CBH28421.1.
RefSeq	YP_003465503.1. NC_013891.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBH28421; CBH28421; lse_2270.
GeneID	9081135.
KEGG	lsg:lse_2270.
PATRIC	32264506. VBILisSee138575_2267.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000070228.
KO	K01580.
Enzyme and pathway databases
BioCyc	LSEE683837:GI10-2236-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D3UR50_LISSS

Accession

Primary (citable) accession number: D3UR50

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)