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D3UJ25

- D3UJ25_HELM1

UniProt

D3UJ25 - D3UJ25_HELM1

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Protein
Submitted name: Putative penicillin-binding protein
Gene
pbpB, HMU12460
Organism
Helicobacter mustelae (strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198) (Campylobacter mustelae)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. penicillin binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciHMUS679897:GJBK-1279-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative penicillin-binding proteinImported
Gene namesi
Name:pbpBImported
Ordered Locus Names:HMU12460Imported
OrganismiHelicobacter mustelae (strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198) (Campylobacter mustelae)Imported
Taxonomic identifieri679897 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000001522: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD3UJ25.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000102304.
KOiK03587.
OMAiNKNIDPY.

Family and domain databases

Gene3Di3.40.710.10. 1 hit.
InterProiIPR012338. Beta-lactam/transpept-like.
IPR005311. PBP_dimer.
IPR001460. PCN-bd_Tpept.
[Graphical view]
PfamiPF03717. PBP_dimer. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view]
SUPFAMiSSF56519. SSF56519. 1 hit.
SSF56601. SSF56601. 1 hit.

Sequencei

Sequence statusi: Complete.

D3UJ25-1 [UniParc]FASTAAdd to Basket

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MNEQSGRIVK VFSVFVVFII IALLLCLFTL GKILGPNHIP FWQSKRIQVA    50
TRGSIYSDDN FDLASSQVLY KVSINTLSID PDKRELFINL FSIYSGMSRE 100
ELQAKLKQKG YIVFSYNIPA NVAANLRQLR SKLLAYDVFR EYQDSSGRIV 150
QKMGIDVEVS GINRNYAYND ALEPVLGYVK KREARSVTIP EGVKGLEKYY 200
NKELSPKQNG IERGDRDIRG NIIRNKTTIL RERINGSDIA LHVNLGLQRK 250
VEKMLDEFYQ QYQVDEIVAG VMDPKSGAIF ALATTNRFDP KNITSNHALN 300
ASVTERPFEP GSTIKPIVFS ILLDKNLINP LELIDLNKGF LQLGRYTIKD 350
DIYPKKNSIV QDILIRSSNV GMIKISRKLS GKEFYEGLKS FGISEASGID 400
LPYERDGVIP SIRKLSGEAY KASASYGYGL TTTFIQLLRA YGVFCNNGIL 450
VTPHLIKNIT DPDGKITTPT FPTRQAIAAP TARKIQEILI KTVQEGTGKR 500
AKIDNLIVGG KTGTARIAKS GGGYSDNIYN GSFFGFVKGG NQTYVIGVVV 550
FGTQHKEDYY GSQTAAPIFK EIARIMQKQN FFKEQK 586
Length:586
Mass (Da):65,523
Last modified:April 20, 2010 - v1
Checksum:i2096E79859BB7D80
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN555004 Genomic DNA. Translation: CBG40500.1.
RefSeqiWP_013023568.1. NC_013949.1.
YP_003517224.1. NC_013949.1.

Genome annotation databases

EnsemblBacteriaiCBG40500; CBG40500; HMU12460.
GeneIDi8865996.
KEGGihms:HMU12460.
PATRICi35380220. VBIHelMus149082_1499.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN555004 Genomic DNA. Translation: CBG40500.1 .
RefSeqi WP_013023568.1. NC_013949.1.
YP_003517224.1. NC_013949.1.

3D structure databases

ProteinModelPortali D3UJ25.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBG40500 ; CBG40500 ; HMU12460 .
GeneIDi 8865996.
KEGGi hms:HMU12460.
PATRICi 35380220. VBIHelMus149082_1499.

Phylogenomic databases

HOGENOMi HOG000102304.
KOi K03587.
OMAi NKNIDPY.

Enzyme and pathway databases

BioCyci HMUS679897:GJBK-1279-MONOMER.

Family and domain databases

Gene3Di 3.40.710.10. 1 hit.
InterProi IPR012338. Beta-lactam/transpept-like.
IPR005311. PBP_dimer.
IPR001460. PCN-bd_Tpept.
[Graphical view ]
Pfami PF03717. PBP_dimer. 1 hit.
PF00905. Transpeptidase. 1 hit.
[Graphical view ]
SUPFAMi SSF56519. SSF56519. 1 hit.
SSF56601. SSF56601. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Comparative genomics and proteomics of Helicobacter mustelae, an ulcerogenic and carcinogenic gastric pathogen."
    O'Toole P.W., Snelling W.J., Canchaya C., Forde B.M., Hardie K.R., Josenhans C., Graham R.L.J., McMullan G., Parkhill J., Belda E., Bentley S.D.
    BMC Genomics 11:164-164(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43772 / LMG 18044 / NCTC 12198 / 12198.

Entry informationi

Entry nameiD3UJ25_HELM1
AccessioniPrimary (citable) accession number: D3UJ25
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 3, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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