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D3UJ25

- D3UJ25_HELM1

UniProt

D3UJ25 - D3UJ25_HELM1

Protein
Submitted name:

Putative penicillin-binding protein

Gene

pbpB

Organism
Helicobacter mustelae (strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198) (Campylobacter mustelae)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. penicillin binding Source: InterPro

    Enzyme and pathway databases

    BioCyciHMUS679897:GJBK-1279-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative penicillin-binding proteinImported
    Gene namesi
    Name:pbpBImported
    Ordered Locus Names:HMU12460Imported
    OrganismiHelicobacter mustelae (strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198) (Campylobacter mustelae)Imported
    Taxonomic identifieri679897 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
    ProteomesiUP000001522: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD3UJ25.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000102304.
    KOiK03587.
    OMAiNKNIDPY.

    Family and domain databases

    Gene3Di3.40.710.10. 1 hit.
    InterProiIPR012338. Beta-lactam/transpept-like.
    IPR005311. PBP_dimer.
    IPR001460. PCN-bd_Tpept.
    [Graphical view]
    PfamiPF03717. PBP_dimer. 1 hit.
    PF00905. Transpeptidase. 1 hit.
    [Graphical view]
    SUPFAMiSSF56519. SSF56519. 1 hit.
    SSF56601. SSF56601. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D3UJ25-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNEQSGRIVK VFSVFVVFII IALLLCLFTL GKILGPNHIP FWQSKRIQVA    50
    TRGSIYSDDN FDLASSQVLY KVSINTLSID PDKRELFINL FSIYSGMSRE 100
    ELQAKLKQKG YIVFSYNIPA NVAANLRQLR SKLLAYDVFR EYQDSSGRIV 150
    QKMGIDVEVS GINRNYAYND ALEPVLGYVK KREARSVTIP EGVKGLEKYY 200
    NKELSPKQNG IERGDRDIRG NIIRNKTTIL RERINGSDIA LHVNLGLQRK 250
    VEKMLDEFYQ QYQVDEIVAG VMDPKSGAIF ALATTNRFDP KNITSNHALN 300
    ASVTERPFEP GSTIKPIVFS ILLDKNLINP LELIDLNKGF LQLGRYTIKD 350
    DIYPKKNSIV QDILIRSSNV GMIKISRKLS GKEFYEGLKS FGISEASGID 400
    LPYERDGVIP SIRKLSGEAY KASASYGYGL TTTFIQLLRA YGVFCNNGIL 450
    VTPHLIKNIT DPDGKITTPT FPTRQAIAAP TARKIQEILI KTVQEGTGKR 500
    AKIDNLIVGG KTGTARIAKS GGGYSDNIYN GSFFGFVKGG NQTYVIGVVV 550
    FGTQHKEDYY GSQTAAPIFK EIARIMQKQN FFKEQK 586
    Length:586
    Mass (Da):65,523
    Last modified:April 20, 2010 - v1
    Checksum:i2096E79859BB7D80
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN555004 Genomic DNA. Translation: CBG40500.1.
    RefSeqiWP_013023568.1. NC_013949.1.
    YP_003517224.1. NC_013949.1.

    Genome annotation databases

    EnsemblBacteriaiCBG40500; CBG40500; HMU12460.
    GeneIDi8865996.
    KEGGihms:HMU12460.
    PATRICi35380220. VBIHelMus149082_1499.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN555004 Genomic DNA. Translation: CBG40500.1 .
    RefSeqi WP_013023568.1. NC_013949.1.
    YP_003517224.1. NC_013949.1.

    3D structure databases

    ProteinModelPortali D3UJ25.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBG40500 ; CBG40500 ; HMU12460 .
    GeneIDi 8865996.
    KEGGi hms:HMU12460.
    PATRICi 35380220. VBIHelMus149082_1499.

    Phylogenomic databases

    HOGENOMi HOG000102304.
    KOi K03587.
    OMAi NKNIDPY.

    Enzyme and pathway databases

    BioCyci HMUS679897:GJBK-1279-MONOMER.

    Family and domain databases

    Gene3Di 3.40.710.10. 1 hit.
    InterProi IPR012338. Beta-lactam/transpept-like.
    IPR005311. PBP_dimer.
    IPR001460. PCN-bd_Tpept.
    [Graphical view ]
    Pfami PF03717. PBP_dimer. 1 hit.
    PF00905. Transpeptidase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56519. SSF56519. 1 hit.
    SSF56601. SSF56601. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genomics and proteomics of Helicobacter mustelae, an ulcerogenic and carcinogenic gastric pathogen."
      O'Toole P.W., Snelling W.J., Canchaya C., Forde B.M., Hardie K.R., Josenhans C., Graham R.L.J., McMullan G., Parkhill J., Belda E., Bentley S.D.
      BMC Genomics 11:164-164(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43772 / LMG 18044 / NCTC 12198 / 12198Imported.

    Entry informationi

    Entry nameiD3UJ25_HELM1
    AccessioniPrimary (citable) accession number: D3UJ25
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3