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D3T4F8 (D3T4F8_THEIA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Thit_1868 EMBL ADD03110.1
OrganismThermoanaerobacter italicus (strain DSM 9252 / Ab9) [Complete proteome] [HAMAP] EMBL ADD03110.1
Taxonomic identifier580331 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaThermoanaerobacteralesThermoanaerobacteraceaeThermoanaerobacter

Protein attributes

Sequence length307 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADD03110.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3T4F8 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 420BA1920D3A5FD4

FASTA30735,913
        10         20         30         40         50         60 
MTMIEEKISP MLAFSSDPFD NPEWIYEIKW DGSRTIAFLS NKTRLQDRRL VDITHQFPDL 

        70         80         90        100        110        120 
ALLHKQIKAK EAILDGELVV LKNGKPSYKS IMSRKHQQNL VKINLLSKIM PVIFITWDIL 

       130        140        150        160        170        180 
YLNGKSLVEL PLIERKDILR KTVKESEVIK ISDFIFEHGK RLFEETGKRG LEGIVAKKVD 

       190        200        210        220        230        240 
SKYLIGKRSK LWLKSKHFIV INAVIIGYRT DKTALILGLY DEENNLINIG SCESGLSQKE 

       250        260        270        280        290        300 
LKAFYEVAKE IKAPDNYYNF KEKNVQWLKP LLTCKVRFME WSENMKMRAP SFIQFEYNVK 


PEECRFE 

« Hide

References

[1]"Complete sequence of Thermoanaerobacter italicus Ab9."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., Hemme C.L., Woyke T.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 9252 / Ab9.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001936 Genomic DNA. Translation: ADD03110.1.
RefSeqYP_003477672.1. NC_013921.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADD03110; ADD03110; Thit_1868.
GeneID8822216.
KEGGtit:Thit_1868.
PATRIC32498828. VBITheIta22270_1913.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMAQDNAAVF.

Enzyme and pathway databases

BioCycTITA580331:GHTM-1924-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3T4F8_THEIA
AccessionPrimary (citable) accession number: D3T4F8
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: April 16, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)