D3T043 (D3T043_NATMM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Methylmalonyl-CoA mutase large subunit EMBL ELY25797.1

Submitted name:
Methylmalonyl-CoA mutase, large subunit EMBL ADD04401.1
EC=5.4.99.2 EMBL ADD04401.1

Gene names

Ordered Locus Names:	Nmag_0817 EMBL ADD04401.1
ORF Names:	C500_16604 EMBL ELY25797.1

Organism

Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) (Natronobacterium magadii) [Complete proteome] [HAMAP] EMBL ADD04401.1

Taxonomic identifier

547559 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Natrialba › Natrialba magadii

Protein attributes

Sequence length	566 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Isomerase EMBL ADD04401.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	cobalamin binding Inferred from electronic annotation. Source: InterPro methylmalonyl-CoA mutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3T043 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: B29BE97144AEFDE2	FASTA	566	63,911
	10 20 30 40 50 60 MFDQEEIDQI REQRERWADD TLEPTLESHG ERQDRFATIS NHEVDRLYTP EDIADLEYDE 70 80 90 100 110 120 DLGFPGEPPY TRGPYPTMYR GRTWTMRQFA GFGTAEETNE RFHYLIDQGQ TGLSTAFDMP 130 140 150 160 170 180 SLMGIDSDHP MSEGEVGKEG VAVDTLRDME ILFDGIDISE VSTSFTINPS AAVIYAMYIA 190 200 210 220 230 240 LADQQDVPRE EIRGTLQNDM LKEFIAQKEW VVPPKPSLDI VTDTIEFAVD ETPKFHPVSI 250 260 270 280 290 300 SGYHIREAGS TAAQEAAFTL ADGFAYVEDC LDRGLEVDEF APLLSFFFNS HNSIFEEVAK 310 320 330 340 350 360 FRASRRIYAR VMDEWYDAER DESKRLKFHT QTAGQSLTAQ QPLNNITRVT IQALAGVLGG 370 380 390 400 410 420 TQSLHTNSFD EALALPSEKA VRVALRTQQI IAEESGAADI VDPMGGSYAI EKLTHEMEAE 430 440 450 460 470 480 IMGYIEDIKE MGDGSIRDGV LDGIDQGYFQ REIQESSYEY QKRVERGEEV VVGVNEYTIE 490 500 510 520 530 540 EDTSPEILKI DETTRDRQLG RLEDVKEERD DEAVDATLEA LSEAIETDEN VMPYIVDAVK 550 560 AYATMGEIMQ VFEDHHGAYQ EELSPV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of chromosome of Natrialba magadii ATCC 43099." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., De Castro R.E., Maupin-Furlow J.A., Woyke T. Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3.
[2]	"A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T." Siddaramappa S., Challacombe J.F., Decastro R.E., Pfeiffer F., Sastre D.E., Gimenez M.I., Paggi R.A., Detter J.C., Davenport K.W., Goodwin L.A., Kyrpides N., Tapia R., Pitluck S., Lucas S., Woyke T., Maupin-Furlow J.A. BMC Genomics 13:165-165(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: ATCC 43099 EMBL ADD04401.1.
[3]	Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A., Eisen J.A., Facciotti M.T. Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: MS-3 EMBL ELY25797.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001932 Genomic DNA. Translation: ADD04401.1. AOHS01000054 Genomic DNA. Translation: ELY25797.1.
RefSeq	YP_003478963.1. NC_013922.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADD04401; ADD04401; Nmag_0817.
GeneID	8823646.
KEGG	nmg:Nmag_0817.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000003918.
KO	K01848.
OMA	STAFDMP.
Enzyme and pathway databases
BioCyc	NMAG547559:GJAP-832-MONOMER.
Family and domain databases
Gene3D	3.20.20.240. 1 hit.
InterPro	IPR016176. Cbl-dep_enz_cat. IPR014348. Cbl-dep_enz_cat-sub. IPR006099. MeMalonylCoA_mutase_a/b_cat. IPR006098. MMCoA_mutase_a_cat. [Graphical view]
Pfam	PF01642. MM_CoA_mutase. 1 hit. [Graphical view]
SUPFAM	SSF51703. Cbl-dep_enz_cat. 1 hit.
TIGRFAMs	TIGR00641. acid_CoA_mut_N. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D3T043_NATMM

Accession

Primary (citable) accession number: D3T043

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)