D3SZI3 (D3SZI3_NATMM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose bisophosphate carboxylase EMBL ELY26719.1
EC=4.1.1.39 EMBL ELY26719.1

Submitted name:
Ribulose bisphosphate carboxylase, type III EMBL ADD04317.1
EC=4.1.1.39 EMBL ADD04317.1

Gene names

Name:	rbcL EMBL ELY26719.1
Ordered Locus Names:	Nmag_0732 EMBL ADD04317.1
ORF Names:	C500_16200 EMBL ELY26719.1

Organism

Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) (Natronobacterium magadii) [Complete proteome] [HAMAP] EMBL ADD04317.1

Taxonomic identifier

547559 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Halobacteria › Halobacteriales › Halobacteriaceae › Natrialba › Natrialba magadii

Protein attributes

Sequence length	418 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL ADD04317.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3SZI3 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: C582979A06488EA7	FASTA	418	44,905
	10 20 30 40 50 60 MTGIEYDDFL DREYNPDSTD LVCTFRIDPA EDMSMEAAAS RVASESSNGT WAALHVDEDE 70 80 90 100 110 120 LTHLGAVAYG IDGDEITVAY PAELFEAGSM PQILSCIAGN IMGMKAVDAI RLEDCKWPES 130 140 150 160 170 180 ITSGFPGPQF GTSVAREKLD AGDRPILATV PKPKVGLSTD AHVRVGEEAW RGGVDLLKDD 190 200 210 220 230 240 ENLTDQDFNP FEDRLAESLA ARDRVEEDVG ERKDYLVNVT AETNEMLERV DLVDEHGGGF 250 260 270 280 290 300 VMVDIITCGW SAVQSVRDRC EKHGLAIHAH RAMHAAFDRM DHHGVSMRVI AQISRLCGVD 310 320 330 340 350 360 HIHTGTAGLG KLANEDTPGI NDWLHGNCHG LNPVLPVASG GLHPGVVDQL IDALGTDICV 370 380 390 400 410 QAGGGIHGHP DGTHAGAKAL RQATDASLDG VPLEEYAQDP AHAELATALK KWGAETPR

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of chromosome of Natrialba magadii ATCC 43099." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., De Castro R.E., Maupin-Furlow J.A., Woyke T. Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3.
[2]	"A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T." Siddaramappa S., Challacombe J.F., Decastro R.E., Pfeiffer F., Sastre D.E., Gimenez M.I., Paggi R.A., Detter J.C., Davenport K.W., Goodwin L.A., Kyrpides N., Tapia R., Pitluck S., Lucas S., Woyke T., Maupin-Furlow J.A. BMC Genomics 13:165-165(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: ATCC 43099 EMBL ADD04317.1.
[3]	Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A., Eisen J.A., Facciotti M.T. Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: MS-3 EMBL ELY26719.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001932 Genomic DNA. Translation: ADD04317.1. AOHS01000051 Genomic DNA. Translation: ELY26719.1.
RefSeq	YP_003478879.1. NC_013922.1.
3D structure databases
ProteinModelPortal	D3SZI3.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADD04317; ADD04317; Nmag_0732.
GeneID	8823560.
KEGG	nmg:Nmag_0732.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000230831.
KO	K01601.
OMA	HRAMHAA.
Enzyme and pathway databases
BioCyc	NMAG547559:GJAP-746-MONOMER.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR017712. RuBisCO_III. IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. IPR017444. RuBisCO_lsu_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. PF02788. RuBisCO_large_N. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
TIGRFAMs	TIGR03326. rubisco_III. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D3SZI3_NATMM

Accession

Primary (citable) accession number: D3SZI3

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)