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D3SY20 (D3SY20_NATMM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=4.1.1.31 EMBL ADD04060.1
Gene names
Ordered Locus Names:Nmag_0472 EMBL ADD04060.1
ORF Names:C500_02774 EMBL ELY33217.1
OrganismNatrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) (Natronobacterium magadii) [Complete proteome] [HAMAP] EMBL ADD04060.1
Taxonomic identifier547559 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeNatrialba

Protein attributes

Sequence length898 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   LigandPyruvate EMBL ADD04060.1
   Molecular functionLyase EMBL ADD04060.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

tricarboxylic acid cycle

Inferred from electronic annotation. Source: InterPro

   Molecular_functionphosphoenolpyruvate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3SY20 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: F3DB0F785C83CD63

FASTA898101,740
        10         20         30         40         50         60 
MQLHNRDVRQ DVRELGALLG DVLEDQTSRQ AFETVESCRR AAIDYRAGEL ESRESLITEL 

        70         80         90        100        110        120 
EGLSPHQQRI VARGFTSYFE LINLAEERER VRSIRTESQA GTLEDSLETA AAELGEEDIE 

       130        140        150        160        170        180 
TVQQVLDDVL IEPTFTAHPT EARRKTVKSK LRAISMALET LDERLLTDKE SGQIWAAIDS 

       190        200        210        220        230        240 
EVTSLWQTPQ VRNRQPEPED EARNVQWYLQ NTLFDVVGEI YDEFADAIDE EVASDIDIPK 

       250        260        270        280        290        300 
LFEFRSWAGS DRDGNPYVTP DVTARTLERQ RSVVLDRYRE QLKRLSGVLS QDGSRIDPGS 

       310        320        330        340        350        360 
EFQAALESDR ERLPGAAKTA AERYPDEPYR QKLKLMRERL DRVGDVRPGG YDDAEELRAD 

       370        380        390        400        410        420 
LTTIATSLRD NGAASVVEAH VDPIRRQVAT FDFSLASLDL RDHQQKHTDA IAEALESEGI 

       430        440        450        460        470        480 
DYHALSEEER AELLTDAILQ DEPVIDLADA VSDDLSDDSA RVLRLFDSLA DWQREYGVEA 

       490        500        510        520        530        540 
IDTYCISMTE EPSHVLEVLF LADQAGVVSL PEHCGIDVVP LLETEYALSG ARRIMGSLFE 

       550        560        570        580        590        600 
NEAYAQALEA RGRTQEIMLG YSDSNKENGF LAANWSLYKN QRRLGEICDD HDVRMRLFHG 

       610        620        630        640        650        660 
RGGSISRGGG PMNEALLALP NSTVTGQVKF TEQGEAIAEK YANPRIAERN IEQMLNAQLR 

       670        680        690        700        710        720 
ARLYAKDQPE DEIREEWIEA METMADAARR EYRDLLESDG FVRYFEQATP ITVIEDLDLG 

       730        740        750        760        770        780 
SRPASRSGER TVEDLRAIPW VFSWTQSRCI LPGWYAIATG IDAYLDDGGD VETLQTMYEE 

       790        800        810        820        830        840 
WPFFRTTLDN AALSLSRTEL EIAEQYAALA DDDLREQFFP RLTGEYERAA DLITEIGQRD 

       850        860        870        880        890 
QLHTRDWLGE NLERRNPYVD PLNLLQTHLL DQTHRTDIEE RTLRLTVKGI AAGMKNTG 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of chromosome of Natrialba magadii ATCC 43099."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., De Castro R.E., Maupin-Furlow J.A., Woyke T.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3.
[2]"A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T."
Siddaramappa S., Challacombe J.F., Decastro R.E., Pfeiffer F., Sastre D.E., Gimenez M.I., Paggi R.A., Detter J.C., Davenport K.W., Goodwin L.A., Kyrpides N., Tapia R., Pitluck S., Lucas S., Woyke T., Maupin-Furlow J.A.
BMC Genomics 13:165-165(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 43099 EMBL ADD04060.1.
[3]Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A., Eisen J.A., Facciotti M.T.
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MS-3 EMBL ELY33217.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001932 Genomic DNA. Translation: ADD04060.1.
AOHS01000010 Genomic DNA. Translation: ELY33217.1.
RefSeqYP_003478622.1. NC_013922.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADD04060; ADD04060; Nmag_0472.
ELY33217; ELY33217; C500_02774.
GeneID8823297.
KEGGnmg:Nmag_0472.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000238647.
KOK01595.
OMAELSTISC.

Enzyme and pathway databases

BioCycNMAG547559:GJAP-483-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3SY20_NATMM
AccessionPrimary (citable) accession number: D3SY20
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 14, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)