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Protein

Superoxide dismutase

Gene

sod

Organism
Natrialba magadii (strain ATCC 43099 / DSM 3394 / CIP 104546 / JCM 8861/ NBRC 102185 / NCIMB 2190 / MS3) (Natronobacterium magadii)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi28Divalent metal cationUniRule annotation1
Metal bindingi76Divalent metal cationUniRule annotation1
Metal bindingi158Divalent metal cationUniRule annotation1
Metal bindingi162Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciNMAG547559:G1GHK-439-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodImported
Ordered Locus Names:Nmag_0456Imported
ORF Names:C500_02699Imported
OrganismiNatrialba magadii (strain ATCC 43099 / DSM 3394 / CIP 104546 / JCM 8861/ NBRC 102185 / NCIMB 2190 / MS3) (Natronobacterium magadii)Imported
Taxonomic identifieri547559 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaHalobacteriaNatrialbalesNatrialbaceaeNatrialba
Proteomesi
  • UP000011543 Componenti: Unassembled WGS sequence
  • UP000001879 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi547559.Nmag_0456

Structurei

3D structure databases

SMRiD3SY04
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 84Sod_Fe_NInterPro annotationAdd BLAST81
Domaini91 – 190Sod_Fe_CInterPro annotationAdd BLAST100

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04147 Archaea
COG0605 LUCA
HOGENOMiHOG000013583
KOiK04564
OMAiYEGWKGE
OrthoDBiPOG093Z0AKF

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

D3SY04-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDHELPPLP YDYDALEPSI SEQVVTWHHD THHQGYVNGL NSAEETLAEN
60 70 80 90 100
RESGDFDSTP GALSNVTHNG CGHYLHTLFW ENMSPDGGGE PAGDIADRIE
110 120 130 140 150
EDFGSYEGWK GEFEAAAGAA GGWALLVYDP VAKQLRNVAV DKHDQGALWG
160 170 180 190 200
SHPILALDVW EHSYYYDYGP DRGSFIEGFF DVINWDSVED EYQKCLDHFE
Length:200
Mass (Da):22,380
Last modified:April 20, 2010 - v1
Checksum:iF79CC69075A0DBF5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001932 Genomic DNA Translation: ADD04044.1
AOHS01000010 Genomic DNA Translation: ELY33202.1
RefSeqiWP_004214016.1, NZ_AOHS01000010.1

Genome annotation databases

EnsemblBacteriaiADD04044; ADD04044; Nmag_0456
ELY33202; ELY33202; C500_02699
GeneIDi8823280
KEGGinmg:Nmag_0456
PATRICifig|547559.17.peg.511

Similar proteinsi

Entry informationi

Entry nameiD3SY04_NATMM
AccessioniPrimary (citable) accession number: D3SY04
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 23, 2018
This is version 52 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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