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D3SRU7 (D3SRU7_NATMM) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Nmag_3169 EMBL ADD06721.1
ORF Names:C500_04553 EMBL ELY32135.1
OrganismNatrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) (Natronobacterium magadii) [Complete proteome] [HAMAP] EMBL ADD06721.1
Taxonomic identifier547559 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaHalobacteriaHalobacterialesHalobacteriaceaeNatrialba

Protein attributes

Sequence length662 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADD06721.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processacetyl-CoA biosynthetic process from acetate

Inferred from electronic annotation. Source: InterPro

   Molecular_functionAMP binding

Inferred from electronic annotation. Source: InterPro

acetate-CoA ligase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3SRU7 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 2491FE025522431D

FASTA66273,010
        10         20         30         40         50         60 
MDDRNGWGRN RPEPTGPTLD PPESFVEQAN VTDTSDDQPL GEQFERDWPD CWERAADLLT 

        70         80         90        100        110        120 
WDESYDTVLD DEDAPFYEWF TDGKLNAAYN CVDRHLEAGR KNHAAIRWEG KQGERETYTY 

       130        140        150        160        170        180 
QDLSVAVNEF AAALRDLGVE ADDVVTIYLP MIPELPIAML ACARIGAPHS VVFAGLSADA 

       190        200        210        220        230        240 
LATRLDAADS EYLVTCDGYY RRGDAFNQKS KADNARLSVD QDVETVVVDR LGDELPHVLG 

       250        260        270        280        290        300 
DGESDYHELR EAFAGASVEP VSRDAEDMLF LMYTSGTTGD PKGVVHSTGG YLAQVAWTAR 

       310        320        330        340        350        360 
SVLDIRPEDT YWCAADIGWI TGHSYIVYGP LALGTTTVMY EGTPDYPDRD RLWEIIDRNA 

       370        380        390        400        410        420 
VDIFYTAPTA VRAFMKWGES YPDSHDLSSL RLLGTVGEPI SPGPWRWYHD HIGNGECPVV 

       430        440        450        460        470        480 
DTWWQTETGA ILISTLPGVD EMKPGAAGPP LPGIDVAVVD EDGNAVDPGQ TGYLTIPRPW 

       490        500        510        520        530        540 
PAMVRTLYDG DDRFRAEYWD RFSDPDVGVW RYFSGDTAAV DEDGYITMLG RVDDVINVAS 

       550        560        570        580        590        600 
TRLSTMEIEG AIADVDGVAE AAVVGRSGQQ GGTEIYAYVS AASDRDPGET LRETILERVE 

       610        620        630        640        650        660 
TAIGPIATPE AVVFTPELPK TRSGKIMRRL LEDIANDEEL GDTSALRNPE IVGEIQSERN 


RS 

« Hide

References

« Hide 'large scale' references
[1]"Complete sequence of chromosome of Natrialba magadii ATCC 43099."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Davenport K., Saunders E., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Mikhailova N., De Castro R.E., Maupin-Furlow J.A., Woyke T.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3.
[2]"A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T."
Siddaramappa S., Challacombe J.F., Decastro R.E., Pfeiffer F., Sastre D.E., Gimenez M.I., Paggi R.A., Detter J.C., Davenport K.W., Goodwin L.A., Kyrpides N., Tapia R., Pitluck S., Lucas S., Woyke T., Maupin-Furlow J.A.
BMC Genomics 13:165-165(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 43099 EMBL ADD06721.1.
[3]Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A., Eisen J.A., Facciotti M.T.
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MS-3 EMBL ELY32135.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001932 Genomic DNA. Translation: ADD06721.1.
AOHS01000022 Genomic DNA. Translation: ELY32135.1.
RefSeqYP_003481283.1. NC_013922.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADD06721; ADD06721; Nmag_3169.
ELY32135; ELY32135; C500_04553.
GeneID8826030.
KEGGnmg:Nmag_3169.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229981.
KOK01895.
OMADRNGWGR.

Enzyme and pathway databases

BioCycNMAG547559:GJAP-3217-MONOMER.

Family and domain databases

InterProIPR011904. Ac_CoA_lig.
IPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
TIGRFAMsTIGR02188. Ac_CoA_lig_AcsA. 1 hit.
PROSITEPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD3SRU7_NATMM
AccessionPrimary (citable) accession number: D3SRU7
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: July 9, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)