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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Thal_0814

Organism
Thermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTALB638303:GHKY-838-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Thal_0814Imported
OrganismiThermocrinis albus (strain DSM 14484 / JCM 11386 / HI 11/12)Imported
Taxonomic identifieri638303 [NCBI]
Taxonomic lineageiBacteriaAquificaeAquificalesAquificaceaeThermocrinis
ProteomesiUP000002043: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD3SL17.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000224394.
KOiK07468.
OMAiGYPHIGR.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

D3SL17-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSPELVKEA LRKNKVKGEN YRGLEYLRFT DDFKDIPRGT ILFKESVIWG
60 70 80 90 100
YPHIGRIFQL SSGLREQFNA PFFVEEKVDG YNVRIFYHEG QVLAVTRGGF
110 120 130 140 150
VCPFTTDRVE EFIDADFFKE NPHLVLCAEV AGPENPYVDE SPPYIREDIR
160 170 180 190 200
FFVFDVMVKG EQRFLPYRQK LQLIEKYRLP SVERYGLYDV SKIGELKALL
210 220 230 240 250
RRLNEEGREG VVFKEDSERD KRVKYITSYA NLQDIRITSL NLMGLPADYY
260 270 280 290 300
TNRLLRLALF MEEEGLQLEE DLLKELGSAF LEGIFEAIRQ SKEEGRVYRT
310 320 330 340 350
FRCRFRKKES ALLFMEQIQH SSSQVQIIER GLKQEGSYWI LEFDRVYLNM
360
TGFLGHVLGG GSVFD
Length:365
Mass (Da):42,745
Last modified:April 20, 2010 - v1
Checksum:i39FB70E9C91FC323
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001931 Genomic DNA. Translation: ADC89447.1.
RefSeqiWP_012991853.1. NC_013894.1.
YP_003473574.1. NC_013894.1.

Genome annotation databases

EnsemblBacteriaiADC89447; ADC89447; Thal_0814.
GeneIDi8814320.
KEGGital:Thal_0814.
PATRICi32507880. VBITheAlb52854_0809.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001931 Genomic DNA. Translation: ADC89447.1.
RefSeqiWP_012991853.1. NC_013894.1.
YP_003473574.1. NC_013894.1.

3D structure databases

ProteinModelPortaliD3SL17.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADC89447; ADC89447; Thal_0814.
GeneIDi8814320.
KEGGital:Thal_0814.
PATRICi32507880. VBITheAlb52854_0809.

Phylogenomic databases

HOGENOMiHOG000224394.
KOiK07468.
OMAiGYPHIGR.

Enzyme and pathway databases

BioCyciTALB638303:GHKY-838-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 14484 / JCM 11386 / HI 11/12Imported.

Entry informationi

Entry nameiD3SL17_THEAH
AccessioniPrimary (citable) accession number: D3SL17
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: March 4, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.