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D3SIC6 (D3SIC6_DEHMG) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:DehalGT_0566 EMBL ADC73933.1
OrganismDehalococcoides mccartyi (strain GT) [Complete proteome] [HAMAP] EMBL ADC73933.1
Taxonomic identifier633145 [NCBI]
Taxonomic lineageBacteriaChloroflexiDehalococcoidiaDehalococcoidalesDehalococcoidaceaeDehalococcoides

Protein attributes

Sequence length283 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Ontologies

Keywords
   Biological processTransport RuleBase RU003512
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcell adhesion

Inferred from electronic annotation. Source: InterPro

metal ion transport

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3SIC6 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 0CD67588F102D3FF

FASTA28331,590
        10         20         30         40         50         60 
MSLILGVTLL SSLLLAGCQE ETPSTAKLKI AVSIVPLKEF TQQIAGDKAE VVLMVPPGAE 

        70         80         90        100        110        120 
PHTYQPLPSQ MVDVSQADMY VKLGSDFGFE QNWLSKILSL NHSMLVVDSS VNITLESSLE 

       130        140        150        160        170        180 
DSGADPHIWL SPRNAIQMVK NITLGLMSLD PENQSYYAAN RDAYLAKLEQ LDNEITLAFS 

       190        200        210        220        230        240 
NLYNRTFLVF HPAWVYFARD YNLKELSIEI EGKEPTPQQM IEIINMAIQN NISIVFASPQ 

       250        260        270        280 
FSSRSAEAIA SEIDGRVVMI DPLAEDYITN MEFVYKQMQE VMS 

« Hide

References

[1]"Complete sequence of Dehalococcoides sp. GT."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Kuske C.R., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G. expand/collapse author list , Ritalahti K.M., Fletcher K.E., Sung Y., Wagner D., Konstantinidis K.T., Loeffler F.E., Woyke T.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: GT EMBL ADC73933.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001924 Genomic DNA. Translation: ADC73933.1.
RefSeqYP_003462389.1. NC_013890.1.

3D structure databases

ProteinModelPortalD3SIC6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC73933; ADC73933; DehalGT_0566.
GeneID8809015.
KEGGdeg:DehalGT_0566.
PATRIC32055078. VBIDehSp13473_0538.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000180308.
KOK09815.

Enzyme and pathway databases

BioCycDSP633145:GHAK-574-MONOMER.

Family and domain databases

InterProIPR006129. AdhesinB.
IPR006128. Lipoprotein_4.
IPR006127. Perip_solute-bd_prot_fam.
[Graphical view]
PfamPF01297. TroA. 1 hit.
[Graphical view]
PRINTSPR00691. ADHESINB.
PR00690. ADHESNFAMILY.
ProtoNetSearch...

Entry information

Entry nameD3SIC6_DEHMG
AccessionPrimary (citable) accession number: D3SIC6
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 14, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)