D3SIC6 (D3SIC6_DEHSG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Periplasmic solute binding protein EMBL ADC73933.1

Gene names

Ordered Locus Names:

DehalGT_0566

Organism

Dehalococcoides sp. (strain GT) [Complete proteome] [HAMAP] EMBL ADC73933.1

Taxonomic identifier

633145 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Chloroflexi › Dehalococcoidetes › Dehalococcoidales › Dehalococcoidaceae › Dehalococcoides › Dehalococcoides mccartyi

Protein attributes

Sequence length	283 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the bacterial solute-binding protein 9 family. RuleBase RU003512

Ontologies

Keywords
Biological process	Transport RuleBase RU003512
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	cell adhesion Inferred from electronic annotation. Source: InterPro metal ion transport Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3SIC6 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: 0CD67588F102D3FF	FASTA	283	31,590
	10 20 30 40 50 60 MSLILGVTLL SSLLLAGCQE ETPSTAKLKI AVSIVPLKEF TQQIAGDKAE VVLMVPPGAE 70 80 90 100 110 120 PHTYQPLPSQ MVDVSQADMY VKLGSDFGFE QNWLSKILSL NHSMLVVDSS VNITLESSLE 130 140 150 160 170 180 DSGADPHIWL SPRNAIQMVK NITLGLMSLD PENQSYYAAN RDAYLAKLEQ LDNEITLAFS 190 200 210 220 230 240 NLYNRTFLVF HPAWVYFARD YNLKELSIEI EGKEPTPQQM IEIINMAIQN NISIVFASPQ 250 260 270 280 FSSRSAEAIA SEIDGRVVMI DPLAEDYITN MEFVYKQMQE VMS

References

[1]

"Complete sequence of Dehalococcoides sp. GT." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Misra M., Chertkov O., Detter J.C., Han C., Tapia R., Kuske C.R., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G. , Ritalahti K.M., Fletcher K.E., Sung Y., Wagner D., Konstantinidis K.T., Loeffler F.E., Woyke T. Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GT.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001924 Genomic DNA. Translation: ADC73933.1.
RefSeq	YP_003462389.1. NC_013890.1.
3D structure databases
ProteinModelPortal	D3SIC6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADC73933; ADC73933; DehalGT_0566.
GeneID	8809015.
KEGG	deg:DehalGT_0566.
PATRIC	32055078. VBIDehSp13473_0538.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000180308.
KO	K09815.
Enzyme and pathway databases
BioCyc	DSP633145:GHAK-568-MONOMER.
Family and domain databases
InterPro	IPR006129. AdhesinB. IPR006128. Lipoprotein_4. IPR006127. Perip_solute-bd_prot_fam. [Graphical view]
Pfam	PF01297. SBP_bac_9. 1 hit. [Graphical view]
PRINTS	PR00691. ADHESINB. PR00690. ADHESNFAMILY.
ProtoNet	Search...

Entry information

Entry name

D3SIC6_DEHSG

Accession

Primary (citable) accession number: D3SIC6

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)