SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D3SBJ4

- D3SBJ4_THISK

UniProt

D3SBJ4 - D3SBJ4_THISK

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: ATP dependent DNA ligase
Gene
TK90_1908
Organism
Thioalkalivibrio sp. (strain K90mix)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciTSP396595:GH8D-1953-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:TK90_1908Imported
OrganismiThioalkalivibrio sp. (strain K90mix)Imported
Taxonomic identifieri396595 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesEctothiorhodospiraceaeThioalkalivibrio
ProteomesiUP000009099: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD3SBJ4.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000224394.
KOiK07468.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

D3SBJ4-1 [UniParc]FASTAAdd to Basket

« Hide

MIERHVLQEA IDNRRAEALT FDELEYARLL EPVNHYPRGS VVLPDGSVVP    50
GYPSIGRIQS LEAGLPRQFE QPFWAEEKID GFNVRILRWQ GRVYAFSRGG 100
YVCAFSTDRV VDFMDPVIFN AEPNLILCAE IAGPDTPYLE GSTPRVAHDV 150
GLFVFDLMRL GQPGFVSQPE KFALIERHAL PPAPLHGWFT PRDTRALGEL 200
IRRLDEEGAE GLVLKTADGQ HRAKYVTGSS CVSDIRVCAE QLLDLPPEYF 250
TNRLTRLAIF LSEHPDRHHA DLDQALGQAL LSGLHGAVAQ HRRQGHVGHR 300
YRCRFREHAS ALRFMNHMRA TGGRHVSFAQ DAPRQEDGYW LLEFERQFDR 350
ITGTLASALA GDRQYD 366
Length:366
Mass (Da):41,390
Last modified:April 20, 2010 - v1
Checksum:i4F091D7DC18F0BDE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001905 Genomic DNA. Translation: ADC72399.1.
RefSeqiWP_012983274.1. NC_013889.1.
YP_003461135.1. NC_013889.1.

Genome annotation databases

EnsemblBacteriaiADC72399; ADC72399; TK90_1908.
GeneIDi8807681.
KEGGitkm:TK90_1908.
PATRICi32527388. VBIThiSp13812_1892.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001905 Genomic DNA. Translation: ADC72399.1 .
RefSeqi WP_012983274.1. NC_013889.1.
YP_003461135.1. NC_013889.1.

3D structure databases

ProteinModelPortali D3SBJ4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADC72399 ; ADC72399 ; TK90_1908 .
GeneIDi 8807681.
KEGGi tkm:TK90_1908.
PATRICi 32527388. VBIThiSp13812_1892.

Phylogenomic databases

HOGENOMi HOG000224394.
KOi K07468.

Enzyme and pathway databases

BioCyci TSP396595:GH8D-1953-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
PRINTSi PR01048. Y414FAMILY.
TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Thioalkalivibrio sp. K90mix."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Foster B., Sun H., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Sorokin D.Y., Muyzer G., Woyke T.
    Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K90mix.

Entry informationi

Entry nameiD3SBJ4_THISK
AccessioniPrimary (citable) accession number: D3SBJ4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 3, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi