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Protein
Submitted name:

Alpha-amylase

Gene

MFS40622_0153

Organism
Methanocaldococcus sp. (strain FS406-22)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciMSP644281:GI4H-158-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:MFS40622_0153Imported
OrganismiMethanocaldococcus sp. (strain FS406-22)Imported
Taxonomic identifieri644281 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
ProteomesiUP000002189 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 57 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000224113.
KOiK07405.
OMAiSDHFYYM.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.

Sequencei

Sequence statusi: Complete.

D3S741-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLITFNFEVH QPHRLNKEIN QNGASLWEKY VDTKLNKEVF NKVANKCYIP
60 70 80 90 100
TNELILELID EYDFKVNYSI TGVFIEQALE FNDYVLDLFK DLVKTGNVEL
110 120 130 140 150
IGETYHHSLT SLFETEEEFI EDIELHRKMY KEIFGFKAKV FRNTELIYNN
160 170 180 190 200
RIAKIAKDLG FKAIFTEGIE KILGWRSPNY LYQSPDGMKI MLRNYRLSDD
210 220 230 240 250
IGFRFSARDW DQYPLMADKY AMWLASTPGE VINIYMDYET FGEHHWEETG
260 270 280 290 300
IFEFLRYLPI EIAKHEHLEV VNVSEVVDRL EPRGEIYVHE FATISWADTE
310 320 330 340 350
RDVSAWLGNK MQRISFEKLK DIGKFIKENA EKLKKVNKFD EIYKMYKVLQ
360 370 380 390 400
TSDNFYYQSI KGLSDMSVHN YFSHFDTPFD AYASYLNILY DFEYYIKKEL
410 420 430 440 450
SKADVDKNDK WKDKQKQYEK NDETKKESLI KTNIIVANDD SSKTESIYSQ
460
NEEDKKDKEY NTFGGFIIA
Length:469
Mass (Da):55,679
Last modified:April 19, 2010 - v1
Checksum:i723AEDCDC3298531
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001901 Genomic DNA. Translation: ADC68851.1.
RefSeqiWP_012979763.1. NC_013887.1.
YP_003457587.1. NC_013887.1.

Genome annotation databases

EnsemblBacteriaiADC68851; ADC68851; MFS40622_0153.
GeneIDi8803992.
KEGGimfs:MFS40622_0153.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001901 Genomic DNA. Translation: ADC68851.1.
RefSeqiWP_012979763.1. NC_013887.1.
YP_003457587.1. NC_013887.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADC68851; ADC68851; MFS40622_0153.
GeneIDi8803992.
KEGGimfs:MFS40622_0153.

Phylogenomic databases

HOGENOMiHOG000224113.
KOiK07405.
OMAiSDHFYYM.

Enzyme and pathway databases

BioCyciMSP644281:GI4H-158-MONOMER.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Methanocaldococcus sp. FS406-22."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Leigh J., Whitman W.B., Woyke T.
    Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FS406-22Imported.

Entry informationi

Entry nameiD3S741_METSF
AccessioniPrimary (citable) accession number: D3S741
Entry historyi
Integrated into UniProtKB/TrEMBL: April 19, 2010
Last sequence update: April 19, 2010
Last modified: January 6, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.