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D3S5Q1 (D3S5Q1_METSF) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UPF0146 protein MFS40622_1492 HAMAP-Rule MF_00341
Gene names
Ordered Locus Names:MFS40622_1492
OrganismMethanocaldococcus sp. (strain FS406-22) [Complete proteome] [HAMAP]
Taxonomic identifier644281 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus

Protein attributes

Sequence length135 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0146 family. HAMAP-Rule MF_00341

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionnucleotide binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3S5Q1 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 230E2C3F71BB0CE3

FASTA13515,804
        10         20         30         40         50         60 
MNVEIIVEFI KNFAEENNCK KIAEVGIGFK FDIAKELSKY FDLIVVDINE KAVEKAKLFG 

        70         80         90        100        110        120 
LNAYKDDLFN PNTKLYKNID LIYSIRPPRD LQLFILDLSK EINANLIIRP LLNEMPIKEL 

       130 
KLKNYKGEVF YIKEK

« Hide

References

[1]"Complete sequence of chromosome of Methanocaldococcus sp. FS406-22."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Leigh J., Whitman W.B., Woyke T.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FS406-22.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001901 Genomic DNA. Translation: ADC70165.1.
RefSeqYP_003458901.1. NC_013887.1.

3D structure databases

ProteinModelPortalD3S5Q1.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC70165; ADC70165; MFS40622_1492.
GeneID8805365.
KEGGmfs:MFS40622_1492.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000228554.
KOK09713.
OMAPPRDLQP.

Enzyme and pathway databases

BioCycMSP644281:GI4H-1545-MONOMER.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
HAMAPMF_00341. UPF0146.
InterProIPR016040. NAD(P)-bd_dom.
IPR005353. UPF0146.
[Graphical view]
PfamPF03686. UPF0146. 1 hit.
[Graphical view]
PIRSFPIRSF016725. UCP016725. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3S5Q1_METSF
AccessionPrimary (citable) accession number: D3S5Q1
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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