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D3S572 (D3S572_METSF) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Tetrahydromethanopterin S-methyltransferase subunit F HAMAP-Rule MF_01099

EC=2.1.1.86 HAMAP-Rule MF_01099
Alternative name(s):
N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit F HAMAP-Rule MF_01099
Gene names
Name:mtrF HAMAP-Rule MF_01099
Ordered Locus Names:MFS40622_1309 EMBL ADC69986.1
OrganismMethanocaldococcus sp. (strain FS406-22) [Complete proteome] [HAMAP] EMBL ADC69986.1
Taxonomic identifier644281 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus

Protein attributes

Sequence length68 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step By similarity. HAMAP-Rule MF_01099

Catalytic activity

5-methyl-5,6,7,8-tetrahydromethanopterin + 2-mercaptoethanesulfonate = 5,6,7,8-tetrahydromethanopterin + 2-(methylthio)ethanesulfonate. HAMAP-Rule MF_01099

Pathway

One-carbon metabolism; methanogenesis from CO(2); methyl-coenzyme M from 5,10-methylene-5,6,7,8-tetrahydromethanopterin: step 2/2. HAMAP-Rule MF_01099

Subunit structure

The complex is composed of 8 subunits; MtrA, MtrB, MtrC, MtrD, MtrE, MtrF, MtrG and MtrH By similarity. HAMAP-Rule MF_01099

Subcellular location

Cell membrane; Single-pass membrane protein By similarity HAMAP-Rule MF_01099.

Sequence similarities

Belongs to the MtrF family. HAMAP-Rule MF_01099

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Transmembrane46 – 6621Helical; By similarity HAMAP-Rule MF_01099

Sequences

Sequence LengthMass (Da)Tools
D3S572 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: D975981E2338D1DC

FASTA687,205
        10         20         30         40         50         60 
MGVEISNKPN VSSIESYVED LEYKVGLITR NRGLESGVES AGTKGLIIGA VSALVLVGIP 


LAIYLLMR 

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References

[1]"Complete sequence of chromosome of Methanocaldococcus sp. FS406-22."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Leigh J., Whitman W.B., Woyke T.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FS406-22 EMBL ADC69986.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001901 Genomic DNA. Translation: ADC69986.1.
RefSeqYP_003458722.1. NC_013887.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC69986; ADC69986; MFS40622_1309.
GeneID8805168.
KEGGmfs:MFS40622_1309.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229653.
KOK00582.
OMAPNISSIQ.

Enzyme and pathway databases

BioCycMSP644281:GI4H-1335-MONOMER.
UniPathwayUPA00640; UER00698.

Family and domain databases

HAMAPMF_01099. MtrF.
InterProIPR011307. MeTrfase_F.
IPR013347. MeTrfase_F_su.
[Graphical view]
PfamPF09472. MtrF. 1 hit.
[Graphical view]
PIRSFPIRSF006523. MtrF. 1 hit.
TIGRFAMsTIGR02507. MtrF. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3S572_METSF
AccessionPrimary (citable) accession number: D3S572
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: February 19, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)