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D3S572

- D3S572_METSF

UniProt

D3S572 - D3S572_METSF

Protein

Tetrahydromethanopterin S-methyltransferase subunit F

Gene

mtrF

Organism
Methanocaldococcus sp. (strain FS406-22)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
  1. Functioni

    Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step.UniRule annotation

    Catalytic activityi

    5-methyl-5,6,7,8-tetrahydromethanopterin + 2-mercaptoethanesulfonate = 5,6,7,8-tetrahydromethanopterin + 2-(methylthio)ethanesulfonate.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. tetrahydromethanopterin S-methyltransferase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. methanogenesis, from carbon dioxide Source: UniProtKB-UniPathway
    2. one-carbon metabolic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    MethyltransferaseUniRule annotationImported, Transferase

    Keywords - Biological processi

    MethanogenesisUniRule annotation, One-carbon metabolismUniRule annotation

    Enzyme and pathway databases

    BioCyciMSP644281:GI4H-1335-MONOMER.
    UniPathwayiUPA00640; UER00698.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Tetrahydromethanopterin S-methyltransferase subunit FUniRule annotation (EC:2.1.1.86UniRule annotation)
    Alternative name(s):
    N5-methyltetrahydromethanopterin--coenzyme M methyltransferase subunit FUniRule annotation
    Gene namesi
    Name:mtrFUniRule annotation
    Ordered Locus Names:MFS40622_1309Imported
    OrganismiMethanocaldococcus sp. (strain FS406-22)Imported
    Taxonomic identifieri644281 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
    ProteomesiUP000002189: Chromosome

    Subcellular locationi

    Cell membrane UniRule annotation; Single-pass membrane protein UniRule annotation

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell membraneUniRule annotation, Membrane

    Interactioni

    Subunit structurei

    The complex is composed of 8 subunits; MtrA, MtrB, MtrC, MtrD, MtrE, MtrF, MtrG and MtrH.UniRule annotation

    Structurei

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei46 – 6621Helical;UniRule annotationAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the MtrF family.UniRule annotation

    Keywords - Domaini

    Transmembrane, Transmembrane helixUniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000229653.
    KOiK00582.
    OMAiPNISSIQ.

    Family and domain databases

    HAMAPiMF_01099. MtrF.
    InterProiIPR011307. MeTrfase_F.
    IPR013347. MeTrfase_F_su.
    [Graphical view]
    PfamiPF09472. MtrF. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006523. MtrF. 1 hit.
    TIGRFAMsiTIGR02507. MtrF. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D3S572-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGVEISNKPN VSSIESYVED LEYKVGLITR NRGLESGVES AGTKGLIIGA   50
    VSALVLVGIP LAIYLLMR 68
    Length:68
    Mass (Da):7,205
    Last modified:April 20, 2010 - v1
    Checksum:iD975981E2338D1DC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001901 Genomic DNA. Translation: ADC69986.1.
    RefSeqiWP_012980894.1. NC_013887.1.
    YP_003458722.1. NC_013887.1.

    Genome annotation databases

    EnsemblBacteriaiADC69986; ADC69986; MFS40622_1309.
    GeneIDi8805168.
    KEGGimfs:MFS40622_1309.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001901 Genomic DNA. Translation: ADC69986.1 .
    RefSeqi WP_012980894.1. NC_013887.1.
    YP_003458722.1. NC_013887.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADC69986 ; ADC69986 ; MFS40622_1309 .
    GeneIDi 8805168.
    KEGGi mfs:MFS40622_1309.

    Phylogenomic databases

    HOGENOMi HOG000229653.
    KOi K00582.
    OMAi PNISSIQ.

    Enzyme and pathway databases

    UniPathwayi UPA00640 ; UER00698 .
    BioCyci MSP644281:GI4H-1335-MONOMER.

    Family and domain databases

    HAMAPi MF_01099. MtrF.
    InterProi IPR011307. MeTrfase_F.
    IPR013347. MeTrfase_F_su.
    [Graphical view ]
    Pfami PF09472. MtrF. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006523. MtrF. 1 hit.
    TIGRFAMsi TIGR02507. MtrF. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Methanocaldococcus sp. FS406-22."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Teshima H., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Sieprawska-Lupa M., Leigh J., Whitman W.B., Woyke T.
      Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: FS406-22Imported.

    Entry informationi

    Entry nameiD3S572_METSF
    AccessioniPrimary (citable) accession number: D3S572
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3