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Protein
Submitted name:

DNA-directed RNA polymerase

Gene

MFS40622_0922

Organism
Methanocaldococcus sp. (strain FS406-22)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferaseImported, Transferase
Biological processTranscription

Enzyme and pathway databases

BioCyciMSP644281:G1GHG-933-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
DNA-directed RNA polymeraseImported (EC:2.7.7.6Imported)
Gene namesi
Ordered Locus Names:MFS40622_0922Imported
OrganismiMethanocaldococcus sp. (strain FS406-22)Imported
Taxonomic identifieri644281 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
Proteomesi
  • UP000002189 Componenti: Chromosome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymeraseImported

Interactioni

Protein-protein interaction databases

STRINGi644281.MFS40622_0922

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini82 – 166S1 motifInterPro annotationAdd BLAST85

Phylogenomic databases

eggNOGiarCOG00675 Archaea
COG1095 LUCA
HOGENOMiHOG000229315
KOiK03049
OMAiMRQPGLG
OrthoDBiPOG093Z0C8D

Family and domain databases

Gene3Di3.30.1490.120, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR036898 RNA_pol_Rpb7-like_N_sf
IPR005576 RNA_pol_Rpb7_N
IPR004519 RNAP_E/RPC8
IPR022967 S1_dom
IPR003029 S1_domain
PfamiView protein in Pfam
PF00575 S1, 1 hit
PF03876 SHS2_Rpb7-N, 1 hit
SMARTiView protein in SMART
SM00316 S1, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
SSF88798 SSF88798, 1 hit
TIGRFAMsiTIGR00448 rpoE, 1 hit
PROSITEiView protein in PROSITE
PS50126 S1, 1 hit

Sequencei

Sequence statusi: Complete.

D3S439-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYKILEIADV VKVPPEEFGK DLKETVKKIL MEKYEGRLDK DIGFILSIVD
60 70 80 90 100
VKDIGNGKVV HGDGSAYHPV VFETLVYMPE MYELIEGEVV DVVEFGSFVR
110 120 130 140 150
LGPLDGLIHV SQIMDDYVSY DPKREAIIGK ETGKVLEIGD YVRARIVAIS
160 170 180
LKAERKRGSK IALTMRQPYL GKLEWIEEEK AKKEQKD
Length:187
Mass (Da):21,248
Last modified:April 20, 2010 - v1
Checksum:i42AE04427C1BA753
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001901 Genomic DNA Translation: ADC69603.1
RefSeqiWP_012980512.1, NC_013887.1

Genome annotation databases

EnsemblBacteriaiADC69603; ADC69603; MFS40622_0922
GeneIDi8804767
KEGGimfs:MFS40622_0922

Similar proteinsi

Entry informationi

Entry nameiD3S439_METSF
AccessioniPrimary (citable) accession number: D3S439
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: March 28, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health