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D3RYB9

- D3RYB9_FERPA

UniProt

D3RYB9 - D3RYB9_FERPA

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Ferp_1330

Organism
Ferroglobus placidus (strain DSM 10642 / AEDII12DO)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (20 Apr 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciFPLA589924:GHX0-1356-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Ferp_1330Imported
    OrganismiFerroglobus placidus (strain DSM 10642 / AEDII12DO)Imported
    Taxonomic identifieri589924 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeFerroglobus
    ProteomesiUP000002613: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000224394.
    KOiK07468.
    OMAiEEKMNGY.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    PRINTSiPR01048. Y414FAMILY.
    TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D3RYB9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYVAEALGLS KPAAEKLKEK NVLKEAFIKH PFFPDVIDAV RFDKRFAGLE    50
    EGTVVAKTIH GVEVVHGFPK IRRALTLYPT IKLHFKGEIV FEEKMNGYNV 100
    RIVMFGKNLY ALTRRGFICP YTTEKARELI NESFFKDYPN LMLCCEAVGR 150
    YSPYVPKDVY GVDFDFYVFD VREKRSGKPL PVKEKEKICE EYGLNLAPIL 200
    AQCKAEEGHV VGRRVVEELE GSGREGVVIK DVNMVVEPIK YTTSETNCND 250
    LSYAFRYFNE YGKDFMFSRI VREGFQSFEF DDEEKFRERC FRLGKAILES 300
    LVKSIKDVSE GRRVVERVEL IFSSFETFEL FTEHLKRSGV NFEVVELKKR 350
    GGKVHAVIDR VMKSTTDKIK SHLGGALW 378
    Length:378
    Mass (Da):43,555
    Last modified:April 20, 2010 - v1
    Checksum:iC6F2A005DDD4C307
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001899 Genomic DNA. Translation: ADC65482.1.
    RefSeqiWP_012965825.1. NC_013849.1.
    YP_003435757.1. NC_013849.1.

    Genome annotation databases

    EnsemblBacteriaiADC65482; ADC65482; Ferp_1330.
    GeneIDi8778846.
    KEGGifpl:Ferp_1330.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001899 Genomic DNA. Translation: ADC65482.1 .
    RefSeqi WP_012965825.1. NC_013849.1.
    YP_003435757.1. NC_013849.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADC65482 ; ADC65482 ; Ferp_1330 .
    GeneIDi 8778846.
    KEGGi fpl:Ferp_1330.

    Phylogenomic databases

    HOGENOMi HOG000224394.
    KOi K07468.
    OMAi EEKMNGY.

    Enzyme and pathway databases

    BioCyci FPLA589924:GHX0-1356-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR001072. Uncharacterised_MJ0414.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    PRINTSi PR01048. Y414FAMILY.
    TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 10642 / AEDII12DOImported.

    Entry informationi

    Entry nameiD3RYB9_FERPA
    AccessioniPrimary (citable) accession number: D3RYB9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 20, 2010
    Last sequence update: April 20, 2010
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3