D3RYB9 (D3RYB9_FERPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADC65482.1

Gene names

Ordered Locus Names:

Ferp_1330

Organism

Ferroglobus placidus (strain DSM 10642 / AEDII12DO) [Complete proteome] [HAMAP] EMBL ADC65482.1

Taxonomic identifier

589924 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Archaeoglobi › Archaeoglobales › Archaeoglobaceae › Ferroglobus › Ferroglobus placidus

Protein attributes

Sequence length	378 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADC65482.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D3RYB9 [UniParc]. Last modified April 20, 2010. Version 1. Checksum: C6F2A005DDD4C307	FASTA	378	43,555
	10 20 30 40 50 60 MYVAEALGLS KPAAEKLKEK NVLKEAFIKH PFFPDVIDAV RFDKRFAGLE EGTVVAKTIH 70 80 90 100 110 120 GVEVVHGFPK IRRALTLYPT IKLHFKGEIV FEEKMNGYNV RIVMFGKNLY ALTRRGFICP 130 140 150 160 170 180 YTTEKARELI NESFFKDYPN LMLCCEAVGR YSPYVPKDVY GVDFDFYVFD VREKRSGKPL 190 200 210 220 230 240 PVKEKEKICE EYGLNLAPIL AQCKAEEGHV VGRRVVEELE GSGREGVVIK DVNMVVEPIK 250 260 270 280 290 300 YTTSETNCND LSYAFRYFNE YGKDFMFSRI VREGFQSFEF DDEEKFRERC FRLGKAILES 310 320 330 340 350 360 LVKSIKDVSE GRRVVERVEL IFSSFETFEL FTEHLKRSGV NFEVVELKKR GGKVHAVIDR 370 VMKSTTDKIK SHLGGALW

References

[1]

"Complete sequence of Ferroglobus placidus DSM 10642." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Holmes D. , Lovley D., Kyrpides N., Anderson I.J., Woyke T. Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 10642 / AEDII12DO.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001899 Genomic DNA. Translation: ADC65482.1.
RefSeq	YP_003435757.1. NC_013849.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADC65482; ADC65482; Ferp_1330.
GeneID	8778846.
KEGG	fpl:Ferp_1330.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000224394.
KO	K07468.
OMA	EEKMNGY.
Enzyme and pathway databases
BioCyc	FPLA589924:GHX0-1357-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR001072. Uncharacterised_MJ0414. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PRINTS	PR01048. Y414FAMILY.
TIGRFAMs	TIGR01209. TIGR01209. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D3RYB9_FERPA

Accession

Primary (citable) accession number: D3RYB9

Entry history

Integrated into UniProtKB/TrEMBL:	April 20, 2010
Last sequence update:	April 20, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)