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D3RYB9 (D3RYB9_FERPA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Ferp_1330 EMBL ADC65482.1
OrganismFerroglobus placidus (strain DSM 10642 / AEDII12DO) [Complete proteome] [HAMAP] EMBL ADC65482.1
Taxonomic identifier589924 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeFerroglobus

Protein attributes

Sequence length378 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADC65482.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D3RYB9 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: C6F2A005DDD4C307

FASTA37843,555
        10         20         30         40         50         60 
MYVAEALGLS KPAAEKLKEK NVLKEAFIKH PFFPDVIDAV RFDKRFAGLE EGTVVAKTIH 

        70         80         90        100        110        120 
GVEVVHGFPK IRRALTLYPT IKLHFKGEIV FEEKMNGYNV RIVMFGKNLY ALTRRGFICP 

       130        140        150        160        170        180 
YTTEKARELI NESFFKDYPN LMLCCEAVGR YSPYVPKDVY GVDFDFYVFD VREKRSGKPL 

       190        200        210        220        230        240 
PVKEKEKICE EYGLNLAPIL AQCKAEEGHV VGRRVVEELE GSGREGVVIK DVNMVVEPIK 

       250        260        270        280        290        300 
YTTSETNCND LSYAFRYFNE YGKDFMFSRI VREGFQSFEF DDEEKFRERC FRLGKAILES 

       310        320        330        340        350        360 
LVKSIKDVSE GRRVVERVEL IFSSFETFEL FTEHLKRSGV NFEVVELKKR GGKVHAVIDR 

       370 
VMKSTTDKIK SHLGGALW 

« Hide

References

[1]"Complete sequence of Ferroglobus placidus DSM 10642."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Holmes D. expand/collapse author list , Lovley D., Kyrpides N., Anderson I.J., Woyke T.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 10642 / AEDII12DO.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001899 Genomic DNA. Translation: ADC65482.1.
RefSeqYP_003435757.1. NC_013849.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC65482; ADC65482; Ferp_1330.
GeneID8778846.
KEGGfpl:Ferp_1330.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000224394.
KOK07468.
OMAEEKMNGY.

Enzyme and pathway databases

BioCycFPLA589924:GHX0-1356-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3RYB9_FERPA
AccessionPrimary (citable) accession number: D3RYB9
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: April 16, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)