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D3RYB9

- D3RYB9_FERPA

UniProt

D3RYB9 - D3RYB9_FERPA

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Ferp_1330
Organism
Ferroglobus placidus (strain DSM 10642 / AEDII12DO)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciFPLA589924:GHX0-1356-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Ferp_1330Imported
OrganismiFerroglobus placidus (strain DSM 10642 / AEDII12DO)Imported
Taxonomic identifieri589924 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeFerroglobus
ProteomesiUP000002613: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

D3RYB9-1 [UniParc]FASTAAdd to Basket

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MYVAEALGLS KPAAEKLKEK NVLKEAFIKH PFFPDVIDAV RFDKRFAGLE    50
EGTVVAKTIH GVEVVHGFPK IRRALTLYPT IKLHFKGEIV FEEKMNGYNV 100
RIVMFGKNLY ALTRRGFICP YTTEKARELI NESFFKDYPN LMLCCEAVGR 150
YSPYVPKDVY GVDFDFYVFD VREKRSGKPL PVKEKEKICE EYGLNLAPIL 200
AQCKAEEGHV VGRRVVEELE GSGREGVVIK DVNMVVEPIK YTTSETNCND 250
LSYAFRYFNE YGKDFMFSRI VREGFQSFEF DDEEKFRERC FRLGKAILES 300
LVKSIKDVSE GRRVVERVEL IFSSFETFEL FTEHLKRSGV NFEVVELKKR 350
GGKVHAVIDR VMKSTTDKIK SHLGGALW 378
Length:378
Mass (Da):43,555
Last modified:April 20, 2010 - v1
Checksum:iC6F2A005DDD4C307
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001899 Genomic DNA. Translation: ADC65482.1.
RefSeqiWP_012965825.1. NC_013849.1.
YP_003435757.1. NC_013849.1.

Genome annotation databases

EnsemblBacteriaiADC65482; ADC65482; Ferp_1330.
GeneIDi8778846.
KEGGifpl:Ferp_1330.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001899 Genomic DNA. Translation: ADC65482.1 .
RefSeqi WP_012965825.1. NC_013849.1.
YP_003435757.1. NC_013849.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADC65482 ; ADC65482 ; Ferp_1330 .
GeneIDi 8778846.
KEGGi fpl:Ferp_1330.

Phylogenomic databases

HOGENOMi HOG000224394.
KOi K07468.
OMAi EEKMNGY.

Enzyme and pathway databases

BioCyci FPLA589924:GHX0-1356-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
PRINTSi PR01048. Y414FAMILY.
TIGRFAMsi TIGR01209. TIGR01209. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 10642 / AEDII12DO.

Entry informationi

Entry nameiD3RYB9_FERPA
AccessioniPrimary (citable) accession number: D3RYB9
Entry historyi
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 3, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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