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D3RVB2 (D3RVB2_ALLVD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Undecaprenyl-diphosphatase HAMAP-Rule MF_01006
EC=3.6.1.27 HAMAP-Rule MF_01006
Alternative name(s):
Bacitracin resistance protein HAMAP-Rule MF_01006
Undecaprenyl pyrophosphate phosphatase HAMAP-Rule MF_01006
Gene names
Name:uppP HAMAP-Rule MF_01006
Ordered Locus Names:Alvin_2122 EMBL ADC63044.1
OrganismAllochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) (Chromatium vinosum) [Complete proteome] [HAMAP] EMBL ADC63044.1
Taxonomic identifier572477 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › Allochromatium ›

Protein attributes

Sequence length271 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin By similarity. HAMAP-Rule MF_01006

Catalytic activity

Ditrans,octacis-undecaprenyl diphosphate + H2O = ditrans,octacis-undecaprenyl phosphate + phosphate. HAMAP-Rule MF_01006 SAAS SAAS003824

Subcellular location

Cell inner membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_01006.

Miscellaneous

Bacitracin is thought to be involved in the inhibition of peptidoglycan synthesis by sequestering undecaprenyl diphosphate, thereby reducing the pool of lipid carrier available By similarity. HAMAP-Rule MF_01006

Sequence similarities

Belongs to the UppP family. HAMAP-Rule MF_01006

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Transmembrane1 – 2121Helical; By similarity HAMAP-Rule MF_01006
Transmembrane39 – 5921Helical; By similarity HAMAP-Rule MF_01006
Transmembrane88 – 10821Helical; By similarity HAMAP-Rule MF_01006
Transmembrane116 – 13621Helical; By similarity HAMAP-Rule MF_01006
Transmembrane148 – 16821Helical; By similarity HAMAP-Rule MF_01006
Transmembrane192 – 21221Helical; By similarity HAMAP-Rule MF_01006
Transmembrane223 – 24321Helical; By similarity HAMAP-Rule MF_01006
Transmembrane251 – 27121Helical; By similarity HAMAP-Rule MF_01006

Sequences

Sequence LengthMass (Da)Tools
D3RVB2 [UniParc].

Last modified April 20, 2010. Version 1.
Checksum: 7B5A0402BD353BA8

FASTA27129,847
        10         20         30         40         50         60 
METIQILVLA FVQGLTEFLP ISSSGHLVLT PLLFGYELQS LAFDVAVHLG TLAAVIVYFR 

        70         80         90        100        110        120 
REIARMLVAV LDSLRTRRFD DPDARLGWMI VLATLPVVVL GLPLKSVLEW LREDDQLIAL 

       130        140        150        160        170        180 
VIAGTTIGFG LLLWWADWRG RRERDEYGLG WGDALVIGLL QAVAIIPGTS RSGITITAGL 

       190        200        210        220        230        240 
LLGLTRQAAS RFSFLLAIPT ILMAGGLETL ELVQTAEPVD WSGLVLGAMV SYLVAYLTIR 

       250        260        270 
FFLSFIERIS MLPFALYRFL LGGVILGLLY L

« Hide

References

[1]"Complete sequence of chromosome of Allochromatium vinosum DSM 180."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Zigann R., Dahl C., Woyke T.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17899 / DSM 180 / NBRC 103801 / D.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001896 Genomic DNA. Translation: ADC63044.1.
RefSeqYP_003444076.1. NC_013851.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC63044; ADC63044; Alvin_2122.
GeneID8787492.
KEGGalv:Alvin_2122.
PATRIC31924026. VBIAllVin64954_2103.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000218357.
KOK06153.

Family and domain databases

HAMAPMF_01006. Undec_diphosphatase.
InterProIPR003824. Bacitracin-R_BacA.
[Graphical view]
PfamPF02673. BacA. 1 hit.
[Graphical view]
TIGRFAMsTIGR00753. undec_PP_bacA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD3RVB2_ALLVD
AccessionPrimary (citable) accession number: D3RVB2
Entry history
Integrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info